FE659103

Overview
NameFE659103
Unique NameFE659103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_SILST (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter sp. (strain TM1040) GN=pckA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.627e-21
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +
Sbjct:  372 HFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIAAHGATCWLVNTGWTGGAYGTGSRMPI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.627e-21
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L +K+ +HGAT WLVNTGW+GG+YG GSR+ +
Sbjct:  372 HFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIARHGATCWLVNTGWTGGAYGVGSRMPI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.627e-21
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +
Sbjct:  372 HFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIATHGATCWLVNTGWTGGAYGTGSRMPI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_DEIRA (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus radiodurans GN=pckA PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 4.737e-21
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = -2
Query:    5 FISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 226
            FISG+TA + GTE+G+ +PT TFS CFGA F+  HP +YA +LA+K+++ GA  WLVNTGW+GG YG G R+ L
Sbjct:  372 FISGFTAKIPGTEEGVTDPTPTFSTCFGAPFMPRHPGEYARLLAQKVEESGAKVWLVNTGWTGGKYGEGHRMSL 445          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_AGRVS (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pckA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.737e-21
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +H    WLVNTGW+GG+YG G+R+ +
Sbjct:  370 HFLSGYTAKVAGTERGVTEPEATFSTCFGAPFMPRHPAEYGNLLKELIARHEVDCWLVNTGWTGGAYGVGNRMPI 444          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CANAL (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida albicans GN=PCK1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.186e-21
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HFISGYT+ +AG+E+G+ EP ATFSACFG  F++LHP KYA  LA+K+ +H A  WL+NTGW G S   G   + P
Sbjct:  389 HFISGYTSKMAGSEEGVTEPHATFSACFGQPFLVLHPMKYAQQLADKISEHNANAWLLNTGWVGSSVAQGGGKRCP 464          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.079e-21
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF++G+TA +AGTE G+KEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+NTGWSGG+YG G RI L
Sbjct:  362 HFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYGTGKRINL 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_VIBVY (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio vulnificus (strain YJ016) GN=pckA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.055e-20
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA +L ++M++ GA  +LVNTGW+G     G RI +
Sbjct:  383 HFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEEAGAEAYLVNTGWNGS----GKRISI 453          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_VIBVU (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio vulnificus GN=pckA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.055e-20
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA +L ++M++ GA  +LVNTGW+G     G RI +
Sbjct:  383 HFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEEAGAEAYLVNTGWNGS----GKRISI 453          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.378e-20
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2
Query:   14 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSR 229
            HFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLA KM +H A  +L+NTGW+G SY  G +
Sbjct:  385 HFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLALHPIRYATMLATKMSQHKANAYLINTGWTGSSYVSGGK 456          
The following BLAST results are available for this feature:
BLAST of FE659103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_SILST3.627e-2158.67Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_SILPO3.627e-2157.33Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_ROSDO3.627e-2158.67Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]
PCKA_DEIRA4.737e-2158.11Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_AGRVS4.737e-2157.33Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_CANAL6.186e-2156.58Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_FUSNN8.079e-2156.00Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_VIBVY1.055e-2061.33Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_VIBVU1.055e-2061.33Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_YEAST1.378e-2058.33Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionC42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659103 ID=FE659103; Name=FE659103; organism=Citrus sinensis; type=EST; length=230bp
ACGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCA
GTGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAG
CATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGC
AAGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCT
ACCAAAGCAGTGTAGCCACTGATGAAATGG
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