EY720905

Overview
NameEY720905
Unique NameEY720905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_DROME (Mediator of RNA polymerase II transcription subunit 10 OS=Drosophila melanogaster GN=MED10 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 1 
Query:  250 LHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKL-SEKCNIQVPMEVL-NLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTFRMKLKHIERY 573
            + Q+ + VS F    Q  L Q++NSLV+ L  + KL S+  ++ VP EV  + ID  KNP  +T+D +   +AKN+  KGK +  K  + +LL EL +TF  ++ +   Y
Sbjct:   19 VRQIRIIVSDFQPQGQNVLNQKINSLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAY 128
The following BLAST results are available for this feature:
BLAST of EY720905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MED10_DROME3.365e-1136.36Mediator of RNA polymerase II transcription subuni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-H02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720905 ID=EY720905; Name=EY720905; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGCCCGGTCTTCTAAATAGCGATTCGCAGAAGTTTTGGGGTC
CTGAAGAAGAAGAAAACTGTAATTACAGTTTCCTGATACGAGAGAAAGAA
AGATGGATGGACCGGTGGGGGGCAGCAGAGCAAGTGGTGGCAATGGAATG
GTGAGCAATCAAGCAAACGATACAACAACTGTGGCAGCTGACGATCCGAA
GCAGAACTTGAACCAGGTTATTAATTCAGTTCAGAAGACTCTTGGGCTCC
TACATCAACTCTACCTTACCGTATCTTCCTTCAATGCTGCCTCCCAGCTC
CCTCTCCTACAAAGACTCAATTCTCTTGTTTCGGAGCTTGACAACATGGT
TAAGTTGTCTGAGAAGTGCAATATTCAAGTGCCCATGGAAGTGCTTAATT
TGATTGATGACGGAAAAAATCCTGATGAATTCACAAGGGATGTTATAAAC
AGCTGCATTGCTAAAAACCAAGTCACCAAAGGAAAAACTGATGCTTTCAA
GAGTTTACGTAAGCATCTTTTGGACGAACTTGAGCAGACATTCCGGATGA
AGTTGAAGCATATAGAGAGATACGTGCAAATTCTGCTGCTGAAGCAAAGC
GTCTTGCTCCATCACAAAGTATGTTGCCAATGGAGATGTGAAAGTTAAAT
CTGAGCTTTAAATGTCCCCATTCATGCAGAGTGTTGGGGCTCTTTCGACT
ACTACTTTTCTCATGGTATGTCATGAGTCGTTCCAGTTCAGCAGCATTCA
NTGATTNAATCTGAAAAAATTGGGTTACTGTATACCATTATGAGGCANTT
CATTTAGAATAAACAATGGCCGGTATACGTGCTTCAATGCATTCATTATG
TGGTTACCTGCTAATGATTGTGATATTTCATGCTTTGATGCCTCCTAACG
T
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