EY720874

Overview
NameEY720874
Unique NameEY720874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            L  NP  G  AG ++E N FEW    +GP DT +E G F AI+SFP +YP +   +       HPN+YPD RV I   + P D+P  Y
Sbjct:   16 LTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            L  NP  G  AG ++E N FEW    +GP DT +E G F AI+SFP +YP +   +       HPN+YPD RV I   + P D+P  Y
Sbjct:   16 LTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            L  NP  G  AG ++E N FEW    +GP DT +E G F AI+SFP +YP +   +       HPN+YPD RV I   + P D+P  Y
Sbjct:   16 LTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            L  NP  G  AG ++E N FEW    +GP DT +E G F AI+SFP +YP +   +       HPN+YPD RV I   + P D+P  Y
Sbjct:   16 LTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQ 348
            L + PV GF   LVDE++++ W V   GP +TLYEGG F A + FP +YP +        +  HPN+Y +  V I   +PP D+PQ
Sbjct:   20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQ 105          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQ 348
            L + PV GF   LVDE++++ W V   GP +TLYEGG F A + FP +YP +        +  HPN+Y +  V I   +PP D+PQ
Sbjct:   20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQ 105          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQ 348
            L + PV GF   LVDE++++ W V   GP +TLYEGG F A + FP +YP +        +  HPN+Y +  V I   +PP D+PQ
Sbjct:   20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQ 105          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQ 348
            L + PV GF   LVDE +++ W V   GP +T YEGG F A + FP +YP +        +  HPN+Y    V I   +PP D+PQ
Sbjct:   20 LQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQ 105          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQ 348
            L + PV GF   LVDE +++ W V   GP +T YEGG F A + FP +YP +        +  HPN+Y    V I   +PP D+PQ
Sbjct:   20 LQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQ 105          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 1
Query:   91 LCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWI 315
            L +NP   F    V+ENNI EW V   GP DTLYEGG F A ++FP  YP     L       HPN+YPD R+ I
Sbjct:   13 LIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCI 86          
The following BLAST results are available for this feature:
BLAST of EY720874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
UB2G2_PONAB3.096e-1443.18Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii... [more]
UB2G2_MOUSE3.096e-1443.18Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus... [more]
UB2G2_HUMAN3.096e-1443.18Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens... [more]
UB2G2_BOVIN3.096e-1443.18Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus G... [more]
UB2R2_RABIT1.537e-1341.86Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus ... [more]
UB2R2_MOUSE1.537e-1341.86Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus... [more]
UB2R2_HUMAN1.537e-1341.86Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
UB2R1_MOUSE7.626e-1340.70Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus... [more]
UB2R1_HUMAN7.626e-1340.70Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens... [more]
UBC_ASFB78.432e-1248.00Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-E05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720874 ID=EY720874; Name=EY720874; organism=Citrus sinensis; type=EST; length=742bp
CACGCGTCCGGCCAATTCCAGCTCTCTCTCTCTACTAAAATCATGGCGGC
ATCTCAGGCAAGTCTCCTCTTGCAAAAACAACTAAAAGATCTTTGTAAGA
ACCCTGTTGCTGGGTTTTCTGCCGGGTTGGTGGATGAGAACAATATCTTT
GAATGGAGTGTTACANTNATTGGACCANCTGATACTCTTTATGAAGGGGG
ANTTTTCANTGCCATTATGAGCTTTCCATNCAACTACCCTAATACCCACC
TACCGTTGAATTTACACCAGAGATTTGGGCATCCTAATGTCTATCCGGAT
TGGCGTGTCTGGATAATCAATCCCTATCCCCCCAGTGACGAACCTCAATG
GTATTAGCCTTGCACATGAACGCCGGGATCCCCTTCATACTGGTGAAAAA
TATCCTTTTGAGTATTATATTAAAGCGTCCCGGGCCCATAAGAAACTCCC
CCCAAATTTTACCCCGCAAAATGGGAAAAACGGGAAATTACTCCCAAAAA
AATTAGCCCCGGTTTAAAAATCCCCAAAATTGTTTTCCCACTGCGGGGCC
CCTTTTTCCCAACCATATTTTTTACCGGGAAAATTTTTTTTAATATTTGG
GGGGAGAAAGGGTCCTGGGGGAAATACAAAAGGCCGGGCCTTTTGTAAAG
GCGGTTTTAAAATTTTCCCCCAACCCCCCCCCCTGTTTCCCCGGGGGGGA
CACCCTGTTGAAAAGGGGGAAACCCCCTCTTTTTTTTCAAAC
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