EY720861

Overview
NameEY720861
Unique NameEY720861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.901e-67
Identity = 126/283 (44.52%), Postives = 174/283 (61.48%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARXHIATEDPSDEXWKFFLEKPENALLNTFPSQISATKVMAILDXLSTHSPDEEYLXKEIEPAWREDRVINAAFEKFKRQLMELEGIIDAXNANPXFEDKNGPGMVPYEL 860
            N LAR+ L   DG  E+S  P KYSME S+ AY K W F  +ALP DL+ RG+AVED S+PHG++L I DYP+A DGL++W AIK WVT+Y   YY     VE D ELQAWW E+R  GHGDKK E WWP L+T ++L +  T I+W+ S  HAA++FG Y+Y GY PNRPT +       +P    ++     P+   L TF  Q+ +   ++I +  S H+ DE YL +     W +D+    AFE+F + L ++E  I   N++  +++++GP  VPY L
Sbjct:  561 NALARETLTY-DGGFETSLFPAKYSMEMSAAAY-KDWVFPEQALPADLLKRGVAVEDLSSPHGIRLLILDYPYAVDGLEIWAAIKSWVTEYCKFYYKSDETVEKDTELQAWWKELREEGHGDKKDEAWWPKLQTRQELRDCCTIIIWIASALHAALHFGLYSYAGYLPNRPTLSCN--LMPEPGSVEYEELKTNPDKVFLKTFVPQLQSLLEISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTL 839          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.643e-21
Identity = 54/175 (30.86%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 536
            N +AR  L+N +G+++   S G+  + +        + + +  LP  L +RG+            L I +Y + +DGL +W AI+ +V++ V +YYP  + V+ D ELQAW  EI       ++   +   L TP ++++ +T I++  S  HAAVN GQ+ +G + PN P++ R
Sbjct:  448 NTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGV------------LAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAWTGEIFAQAFLGRESSGFPSRLCTPGEMVKFLTAIIFNCSAQHAAVNSGQHDFGAWMPNAPSSMR 610          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 55/175 (31.43%), Postives = 95/175 (54.29%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 536
            N +AR  L+N DG+++   S G+  + +        + +    LP  + +RG+            LTI +Y + +DGL +W AI+++V++ V++YYP  + V+ D ELQAW  EI       ++   +   L TP +L++ +T I++  S  HAA N GQ+ +G + PN P++ R
Sbjct:  448 NTIARATLLNPDGLVDKVTSIGRQGLIYLMSTGLAHFTYTDFCLPDSIRARGV------------LTIPNYHYRDDGLKIWAAIERFVSEIVSYYYPSDASVQQDCELQAWVGEIFAQAFLGRESSGFPSRLCTPGELVKYLTAIIFNCSAQHAAFNSGQHDFGAWMPNAPSSMR 610          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: AOSL_PLEHO (Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.052e-19
Identity = 77/270 (28.52%), Postives = 128/270 (47.41%), Query Frame = 3
Query:   18 LARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGDKKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARXHIATEDPSDEXWKFFLEKPENALLNTFPSQISATKVMAILDXLSTHSPDEEYLXKEIEPAWREDRVINAAFEKFKRQLMELEGIIDAXNAN 812
            + R+ L+ + GI++ S S G            K+       LP  L  RG  V+DPS   G       + + +DGL LW+AI+ ++ + +  +Y +   V+ D E+Q+W  ++      V  G + H    P   ++ + L E++T++V+  S  HAAVNF Q  + G+ PN P   R       P  +  +  L+    ++L+T PS+  A K +A +  L+  S DE YL      AW ED+    A  +F+ +L ++   I   N N
Sbjct:  799 IGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR-----HPPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNEN 1047          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LX15B_MOUSE (Arachidonate 15-lipoxygenase B OS=Mus musculus GN=Alox15b PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.979e-18
Identity = 73/257 (28.40%), Postives = 122/257 (47.47%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARXHIATEDPSDEXWKFFLEKPENALLNTFPSQISATKVMAILDXLSTHSPDEEYLXKEIEPAWREDRVINAAFEKFKRQLMEL 782
            N LAR+ LV    +I+ S   G            +Q  +    LP+D+ +RG  VED          I  Y + +DG+ +W AIK +V++ V+ YYP  + V+ D+ELQAW  EI + G   ++      +L T + L++ IT +++  S  HAAV+ GQ+    + PN P T +    T             +PE + + T P+  S++  +  L  LS    D+  L    +  + ED     +   F+R+L+++
Sbjct:  414 NTLARELLVAPGKLIDKSTGLGTGGFSDLIKRNMEQLNYSVLCLPEDIRARG--VED----------IPGYYYRDDGMQIWGAIKSFVSEIVSIYYPSDTSVQDDQELQAWVREIFSEGFLGRESSGMPSLLDTREALVQYITMVIFTCSAKHAAVSSGQFDSCVWMPNLPPTMQLPPPTSKGQ--------ARPE-SFIATLPAVNSSSYHIIALWLLSAEPGDQRPLGHYPDEHFTED-APRRSVAAFQRKLIQI 648          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LX12B_RAT (Arachidonate 12-lipoxygenase, 12R type OS=Rattus norvegicus GN=Alox12b PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 536
            N + R  L+N  G+   + S G        V    +  +    +P D + RG  V+D          +  Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W  EI      +++   +   L+T  +LIE +T +++  S  HAAVN GQ  Y  + PN P++ R
Sbjct:  438 NSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLERESSGFPTCLRTVPELIEYVTMVMYTCSARHAAVNTGQLEYTSWMPNFPSSMR 600          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LX12B_HUMAN (Arachidonate 12-lipoxygenase, 12R type OS=Homo sapiens GN=ALOX12B PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 536
            N + R  L+N  G+     S G        V    +  +D   LP D + RG  V+D          +  Y + +D L +W+A++++VT+ + +YYP  + VE D ELQ+W  EI       ++   +   L+T  +LI  +T +++  S  HAAVN GQ  +  + PN P + R
Sbjct:  438 NSIGRAVLLNEGGLSAKGMSLGVEGFAGVMVRALSELTYDSLYLPNDFVERG--VQD----------LPGYYYRDDSLAVWNALEKYVTEIITYYYPSDAAVEGDPELQSWVQEIFKECLLGRESSGFPRCLRTVPELIRYVTIVIYTCSAKHAAVNTGQMEFTAWMPNFPASMR 600          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LX12B_MOUSE (Arachidonate 12-lipoxygenase, 12R type OS=Mus musculus GN=Alox12b PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16
Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 536
            N + R  L+N  G+   + S G        V    +  +    +P D + RG  V+D          +  Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W  EI       ++   +   L+T  +LIE +T +++  S  HAAVN GQ  Y  + PN P++ R
Sbjct:  438 NSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLGRESSGFPTCLRTIPELIEYVTMVMYTCSARHAAVNSGQLEYTSWMPNFPSSMR 600          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 62/225 (27.56%), Postives = 108/225 (48.00%), Query Frame = 3
Query:  147 KDLISRGLAVEDPSAPHGLKLTIEDYPF---ANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARXHIATEDPSDEXWKFFLEKPENALLNTFPSQISATKVMAILDXLSTHSPDEEYLXKEIEPAWREDRVINAAFEKFKRQLMELEGIIDAXNAN 812
            +DL    L   +     G+  T ED P+    +DGL +W+AI+ + T+ V+ YY D  +VE D+ELQ +  ++   G   +K   +   +K+ + L E +T +++  S  HAAVNFGQY +  + PN P T R       P        +E+    +++T P +  +   +  +  LS    +E +L    E  + E + +  A  +F++ L  +  +I   N N
Sbjct:  441 QDLTYSSLCFPEAIKARGMDNT-EDIPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMR-----APPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIE-KPVKEAMIRFRKNLEAIVSVIAERNKN 654          
BLAST of EY720861 vs. ExPASy Swiss-Prot
Match: LX15B_HUMAN (Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=ALOX15B PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 51/171 (29.82%), Postives = 87/171 (50.88%), Query Frame = 3
Query:   12 NGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRP 524
            N LAR+ L+    +++ S   G            KQ  +    LP+D+ +RG  VED          I  Y + +DG+ +W A++++V++ +  YYP    V+ D ELQAW  EI + G  +++       L+T + L++ +T +++  S  HAAV+ GQ+    + PN P
Sbjct:  413 NTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRG--VED----------IPGYYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLP 571          
The following BLAST results are available for this feature:
BLAST of EY720861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LOXB_SOLLC8.901e-6744.52Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOXE3_HUMAN9.643e-2130.86Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=A... [more]
LOXE3_MOUSE1.645e-2031.43Epidermis-type lipoxygenase 3 OS=Mus musculus GN=A... [more]
AOSL_PLEHO4.052e-1928.52Allene oxide synthase-lipoxygenase protein OS=Plex... [more]
LX15B_MOUSE9.979e-1828.40Arachidonate 15-lipoxygenase B OS=Mus musculus GN=... [more]
LX12B_RAT3.792e-1730.29Arachidonate 12-lipoxygenase, 12R type OS=Rattus n... [more]
LX12B_HUMAN6.468e-1729.71Arachidonate 12-lipoxygenase, 12R type OS=Homo sap... [more]
LX12B_MOUSE1.103e-1630.29Arachidonate 12-lipoxygenase, 12R type OS=Mus musc... [more]
LOX5_RAT4.193e-1627.56Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LX15B_HUMAN1.593e-1529.82Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-D04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720861 ID=EY720861; Name=EY720861; organism=Citrus sinensis; type=EST; length=861bp
CACGCGTCCGCAATGGTTTGGCTCGACAAGCTCTTGTTAATGCTGATGGA
ATCATTGAAAGCTCATTCTCACCTGGAAAGTACTCTATGGAATTCAGCTC
TGTTGCCTATGACAAGCAATGGCGCTTTGACCATGAAGCACTCCCCAAAG
ACCTAATTAGCCGGGGATTGGCTGTTGAAGATCCAAGTGCTCCACATGGC
TTGAAGCTAACAATTGAAGACTATCCTTTTGCCAATGATGGCCTTGATCT
CTGGGATGCCATAAAACAATGGGTTACCGATTATGTTAATCACTACTACC
CTGATAAAAGCCTTGTAGAATCTGATGAAGAGCTCCAAGCTTGGTGGACT
GAAATTCGAACTGTGGGACACGGTGACAAGAAACATGAACCTTGGTGGCC
TGTCTTGAAAACCCCTAAGGATTTAATTGAAATCATCACAACTATTGTTT
GGGTAACATCTGGTCACCACGCAGCTGTTAACTTCGGCCAATACACTTAC
GGAGGCTATTTCCCCAATAGGCCAACCACTGCAAGATGNCACATTGCCAC
TGAAGATCCATCTGATGAANCATGGAAATTCTTCCTTGAAAAACCTGAAA
ATGCACTTTTGAATACCTTCCCTTCCCAGATTTCAGCTACTAAAGTTATG
GCTATTCTTGATGNTTTATCGACTCATTCTCCTGATGAGGAGTATTTANG
AAAAGAAATAGAGCCAGCATGGCGTGAGGATCGGGTTATAAATGCAGCAT
TTGAAAAGTTTAAAAGGCAGTTAATGGAGCTTGAGGGGATTATTGATGCA
NGGAATGCAAATCCCAANTTTGAGGATAAAAATGGACCTGGGATGGTGCC
ATATGAGCTCC
back to top