FE659085

Overview
NameFE659085
Unique NameFE659085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length340
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:152..491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.292e-46
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDE 340
            PG ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DE
Sbjct:  286 PGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALDE 398          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.214e-45
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDE 340
            PG ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DE
Sbjct:  286 PGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPYVGDSKRALDE 398          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.070e-45
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDE 340
            PG ++LA +    +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DE
Sbjct:  286 PGALELAWQHRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALDE 398          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.697e-44
Identity = 96/114 (84.21%), Postives = 97/114 (85.09%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPYVGDSKRAMDE 340
            PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN    G     P     IKYVPYV   +RAMDE
Sbjct:  289 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNVFFMGLVNTRPRW---IKYVPYVA-IERAMDE 398          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.131e-38
Identity = 80/115 (69.57%), Postives = 91/115 (79.13%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDE 340
            PGLI+LA + + LI GDDFKSGQTKMKSVL  FLV AGI+P SI SYNHLGNNDG NLS+PQ FRSKEISK++VVDD++ SN ILY    G   DH +VIKY+  VGDSK AMDE
Sbjct:  306 PGLIELAEKNDSLIAGDDFKSGQTKMKSVLAQFLVDAGIRPVSIASYNHLGNNDGYNLSSPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYMHAVGDSKVAMDE 420          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.131e-38
Identity = 78/115 (67.83%), Postives = 92/115 (80.00%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG--PGEHPDHVVVIKYVPYVGDSKRAMDE 340
            PG+I+LA + +  IGGDDFKSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLS+P+ FRSKEISK +VVDD++ SN +LY    G+  DH +VIKY+P VGDSK AMDE
Sbjct:  295 PGVIELAEKYDSFIGGDDFKSGQTKIKSVLAQFLVDAGIKPLSIASYNHLGNNDGYNLSSPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLPAVGDSKVAMDE 409          
BLAST of FE659085 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 1.345e-36
Identity = 77/115 (66.96%), Postives = 88/115 (76.52%), Query Frame = 2
Query:    2 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDE 340
            PGL+ LA      I GDD KSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLSAP+ FRSKEISKS+V+DD+++SN ILY    G+  DH +VIKY+  VGDSK AMDE
Sbjct:  303 PGLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDE 417          
The following BLAST results are available for this feature:
BLAST of FE659085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_RAT9.292e-4675.22Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_MOUSE1.214e-4575.22Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_HUMAN2.070e-4576.11Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_CITPA8.697e-4484.21Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_CANGA7.131e-3869.57Inositol-3-phosphate synthase OS=Candida glabrata ... [more]
INO1_CANAL7.131e-3867.83Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST1.345e-3666.96Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionC24 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659085 ID=FE659085; Name=FE659085; organism=Citrus sinensis; type=EST; length=340bp
ACCAGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTGGTGGAG
ATGACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTTGATTTC
CTTGTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAACCACCT
GGGAAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCCGCTCCA
AGGAGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGCAATGGT
ATCCTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCATCAAGTA
TGTGCCATATGTTGGCGATAGCAAGAGAGCCATGGATGAG
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