EY720591

Overview
NameEY720591
Unique NameEY720591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDKL2_RAT (Cyclin-dependent kinase-like 2 OS=Rattus norvegicus GN=Cdkl2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 197
            V+Q +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR    P   +T  V
Sbjct:  102 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYTDYV 162
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDKL2_RABIT (Cyclin-dependent kinase-like 2 OS=Oryctolagus cuniculus GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 197
            V+Q +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR    P   +T  V
Sbjct:  102 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYTDYV 162
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDKL2_MOUSE (Cyclin-dependent kinase-like 2 OS=Mus musculus GN=Cdkl2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 197
            V+Q +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR    P   +T  V
Sbjct:  102 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYTDYV 162
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDKL2_MACFA (Cyclin-dependent kinase-like 2 OS=Macaca fascicularis GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 197
            V+Q +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR    P   +T  V
Sbjct:  102 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYTDYV 162
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDKL2_HUMAN (Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV 197
            V+Q +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR    P   +T  V
Sbjct:  102 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYTDYV 162
[Close]
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDK7_XENLA (Cell division protein kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 3 
Query:   15 LQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVL 200
            +++++   L+G+ Y H   +LHRDLKP NLL+D     LKLADFGLA++FG P R +TH+V+
Sbjct:  120 IKSYMLMTLQGLEYLHHLWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRIYTHQVV 180
The following BLAST results are available for this feature:
BLAST of EY720591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CDKL2_RAT5.241e-1145.16Cyclin-dependent kinase-like 2 OS=Rattus norvegicu... [more]
CDKL2_RABIT5.241e-1145.16Cyclin-dependent kinase-like 2 OS=Oryctolagus cuni... [more]
CDKL2_MOUSE5.241e-1145.16Cyclin-dependent kinase-like 2 OS=Mus musculus GN=... [more]
CDKL2_MACFA5.241e-1145.16Cyclin-dependent kinase-like 2 OS=Macaca fascicula... [more]
CDKL2_HUMAN5.241e-1145.16Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=... [more]
CDK7_XENLA6.845e-1150.00Cell division protein kinase 7 OS=Xenopus laevis G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-F03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720591 ID=EY720591; Name=EY720591; organism=Citrus sinensis; type=EST; length=856bp
CCACGCGTCCGGTCTTGCAGACATTCCTTTATCAAATTCTACGTGGCATT
GCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTGAAACCACAAAA
TTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTAGCAGATTTTGGAC
TGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACACATGAGGTACTA
AAGATGACTGCATTTAAGTTTCTGAACAATAATGTTTTATTATTGTATCA
AAGAAAACATATAGCGGTGTACTAGGGATGCAGAACTTCTATTTCTACAA
TTTTGGTTGGCCATACGAGTGAGTCTAGTCTGATTTTATACGAGGGAGAG
TGTGTGCTCATCTTTGTATCTACTAGGATTTACCTTTGTTTGAGCTTTTT
TTTTTTGGGCGGTTGGAGGCTGCTGGTATGCCCCAAATATTGTAAACTCT
TTTTCTTTCTTTTTAGCATTGGGGTAGTACTGGTATCCCAATATACTTTA
GCTTCTTAAGGTATCGTGTACTGGCTGGTTCATTGATACTGCAGTTTCTN
CAGGTATTATGTATCGGCTACTTCAGTGATTAAAATTTTCTGTTGATACC
ATGGCCTTGCTGCGTNTATACTCAATATCAGTTCTCTCTAGGTGGTGACA
TTGTGGTACAGAGCACCTGANATATTACTAGGATCTCGCCATTACTCTAC
TCCAGTTGATGTGTGGTCCGTGGGATGTATATTTGCTGAGATGGTGAACA
GCGGCCATTGTTCCAGGAGACTCTAGATTGATGAGTTATTCAGATCTCCA
GGTTATGGTTCCCCAAACTGGATAAAATCATTCAGTAATATATGAAATAT
GATATG
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