EY720591

Overview
NameEY720591
Unique NameEY720591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.376e-19
Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 3
Query:    6 RPVLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            R  ++++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEV+ +
Sbjct:  102 RSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GVIKLADFGLARAFGIPVRVYTHEVVTL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEV+ +
Sbjct:  104 LVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEV+ +
Sbjct:  104 LVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEV+ +
Sbjct:  104 LVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 3
Query:   18 QTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            ++FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEV+ +
Sbjct:  103 KSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTL 164          

HSP 2 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3
Query:  642 VVTLWYRAPXILLGSRHYSTPVDVWSVGCIFAEMVN 749
            VVTLWYRAP IL+GS+ YSTP+D+WSVGCIFAEMVN
Sbjct:  161 VVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVN 196          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 3
Query:   18 QTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            ++FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEV+ +
Sbjct:  103 KSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTL 164          

HSP 2 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3
Query:  642 VVTLWYRAPXILLGSRHYSTPVDVWSVGCIFAEMVN 749
            VVTLWYRAP IL+GS+ YSTP+D+WSVGCIFAEMVN
Sbjct:  161 VVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVN 196          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQIL+GI +CH+ RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEV+ +
Sbjct:  104 LVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 43/65 (66.15%), Postives = 57/65 (87.69%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQ+L+G+AY H HR+LHRDLKPQNLLIDR+  ALKLADFGLARA  IPVR +THE++ +
Sbjct:  105 LIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQ-GALKLADFGLARAVSIPVRVYTHEIVTL 168          

HSP 2 Score: 71.2478 bits (173), Expect = 8.086e-12
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3
Query:  642 VVTLWYRAPXILLGSRHYSTPVDVWSVGCIFAEMVN-----SGHCSRRL*IDELFR 794
            +VTLWYRAP +LLGS+ YS PVD+WSVGCIF EM+N     SG C     ID++FR
Sbjct:  165 IVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCE----IDQIFR 216          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 3
Query:   12 VLQTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            +++++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THE + +
Sbjct:  104 LVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEAITL 167          
BLAST of EY720591 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 3
Query:   18 QTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVLKM 206
            ++FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEV+ +
Sbjct:  104 KSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTL 165          

HSP 2 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3
Query:  642 VVTLWYRAPXILLGSRHYSTPVDVWSVGCIFAEMVN 749
            VVTLWYRAP IL+GS+ YSTP+D+WSVGCIFAEMVN
Sbjct:  162 VVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVN 197          
The following BLAST results are available for this feature:
BLAST of EY720591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CDC2_CHICK1.376e-1968.66Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_RAT1.797e-1967.69Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_PONAB1.797e-1967.69Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_BOVIN1.797e-1967.69Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2H_PLAVI1.797e-1973.02Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAKH1.797e-1973.02Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2_RANDY3.066e-1967.69Cell division control protein 2 homolog OS=Rana dy... [more]
CDC2_DICDI3.066e-1966.15Cell division control protein 2 homolog OS=Dictyos... [more]
CDC2_HUMAN4.004e-1966.15Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2H_PLAYO4.004e-1971.43Cell division control protein 2 homolog OS=Plasmod... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-F03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720591 ID=EY720591; Name=EY720591; organism=Citrus sinensis; type=EST; length=856bp
CCACGCGTCCGGTCTTGCAGACATTCCTTTATCAAATTCTACGTGGCATT
GCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTGAAACCACAAAA
TTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTAGCAGATTTTGGAC
TGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACACATGAGGTACTA
AAGATGACTGCATTTAAGTTTCTGAACAATAATGTTTTATTATTGTATCA
AAGAAAACATATAGCGGTGTACTAGGGATGCAGAACTTCTATTTCTACAA
TTTTGGTTGGCCATACGAGTGAGTCTAGTCTGATTTTATACGAGGGAGAG
TGTGTGCTCATCTTTGTATCTACTAGGATTTACCTTTGTTTGAGCTTTTT
TTTTTTGGGCGGTTGGAGGCTGCTGGTATGCCCCAAATATTGTAAACTCT
TTTTCTTTCTTTTTAGCATTGGGGTAGTACTGGTATCCCAATATACTTTA
GCTTCTTAAGGTATCGTGTACTGGCTGGTTCATTGATACTGCAGTTTCTN
CAGGTATTATGTATCGGCTACTTCAGTGATTAAAATTTTCTGTTGATACC
ATGGCCTTGCTGCGTNTATACTCAATATCAGTTCTCTCTAGGTGGTGACA
TTGTGGTACAGAGCACCTGANATATTACTAGGATCTCGCCATTACTCTAC
TCCAGTTGATGTGTGGTCCGTGGGATGTATATTTGCTGAGATGGTGAACA
GCGGCCATTGTTCCAGGAGACTCTAGATTGATGAGTTATTCAGATCTCCA
GGTTATGGTTCCCCAAACTGGATAAAATCATTCAGTAATATATGAAATAT
GATATG
back to top