EY720529

Overview
NameEY720529
Unique NameEY720529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720529 vs. ExPASy Swiss-Prot
Match: PCKA_COXBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiella burnetii (strain Dugway 5J108-111) GN=pckA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 2
Query:   38 GAVLENVVCDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDG-IKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWARHTGWSGGSYG-CGSRIKLPYTRKSLDAIQSGSLVECNYKKLMYLGVEIPPESRGVPSQVAIARR 625
            GA++ENVV DE+    DY+D  +T+N+RAAYP E+IP       G  P  V+ L CD  GVLPPV+ L   Q  Y+F+SGYTALV  TE G +K  T+TFS CFGA F    PT YA +L ++++  G   +  +TGW+GG+YG  G R  +P TR  ++A+ SG L E   + L    + IP  + GV   +   R+
Sbjct:  280 GAIMENVVLDENGVP-DYADARLTQNSRAAYPREHIPLRVENNRGRPPDAVLFLTCDLDGVLPPVALLTKEQAAYYFLSGYTALVGSTEVGSVKGVTSTFSTCFGAPFFPRPPTVYAELLMKRIEATGCQVYLVNTGWTGGAYGEGGERFSIPTTRAIVNAVLSGKLKEGPTEVLSGFNLTIPKSALGVDDHLLNPRK 476          
BLAST of EY720529 vs. ExPASy Swiss-Prot
Match: PCKA_COXB1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiella burnetii (strain CbuK_Q154) GN=pckA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 2
Query:   38 GAVLENVVCDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDG-IKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWARHTGWSGGSYG-CGSRIKLPYTRKSLDAIQSGSLVECNYKKLMYLGVEIPPESRGVPSQVAIARR 625
            GA++ENVV DE+    DY+D  +T+N+RAAYP E+IP       G  P  V+ L CD  GVLPPV+ L   Q  Y+F+SGYTALV  TE G +K  T+TFS CFGA F    PT YA +L ++++  G   +  +TGW+GG+YG  G R  +P TR  ++A+ SG L E   + L    + IP  + GV   +   R+
Sbjct:  280 GAIMENVVLDENGVP-DYADARLTQNSRAAYPREHIPLRVENNRGRPPDAVLFLTCDLDGVLPPVALLTKEQAAYYFLSGYTALVGSTEVGSVKGVTSTFSTCFGAPFFPRPPTVYAELLMKRIEATGCQVYLVNTGWTGGAYGEGGERFSIPTTRAIVNAVLSGKLKEGPTEVLSGFNLTIPKSALGVDDHLLNPRK 476          
BLAST of EY720529 vs. ExPASy Swiss-Prot
Match: PCKA_BAUCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=pckA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.200e-34
Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 2
Query:   41 AVLENVVCDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPC-VGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWARHTGWSGGSYGCGSRIKLPYTRKSLDAIQSGSLVECNYKKLMYLGVEIPPESRGVPSQV 610
            A+LENV+       V+Y D S T+N R +YP+ +I N   P     H   +I L  DAFGVLPPV+ L   Q  Y+F+SG++A ++GTE GI  P  TFSACFGAAF+ LHPT YAA+LA++M   G   +  +TGW+G     GSRI L  T+  ++AI +  + +    KL    + IP    GV S +
Sbjct:  306 ALLENVMV-RADGSVNYHDNSKTDNARVSYPLNHIKNRVQPVSCASHASTIIFLTADAFGVLPPVATLTNEQAQYYFLSGFSAKLSGTERGIISPVPTFSACFGAAFLALHPTVYAALLAKRMNIAGTNAYLVNTGWNGN----GSRIALKDTKAIINAILNKQIQDTPTIKLPIFNLSIPQILIGVDSNI 491          
BLAST of EY720529 vs. ExPASy Swiss-Prot
Match: PCKA_WIGBR (Phosphoenolpyruvate carboxykinase [ATP] OS=Wigglesworthia glossinidia brevipalpis GN=pckA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.880e-31
Identity = 75/188 (39.89%), Postives = 113/188 (60.11%), Query Frame = 2
Query:   41 AVLENVVCDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWARHTGWSGGSYGCGSRIKLPYTRKSLDAIQSGSLVECNYKKLMYLGVEIPPESRGVP 601
            A+LENV+  + +  +++ D + TEN+R +YPI +I N   P     HPKN+I L  DAFGV P VSKL+  Q  Y+F+SG+T+ ++GTE GI +P  TFS+CFG AF+ LHPT YA +L   ++ + +  +  +TGW+G       R  L YTR  ++AI    +   +   +    ++IP +  GVP
Sbjct:  307 AILENVMVLKDSN-INFFDGTKTENSRVSYPINHIKNIVKPISQSGHPKNIIFLTADAFGVFPFVSKLSYFQGQYYFLSGFTSKLSGTERGIIDPEPTFSSCFGEAFLSLHPTVYAKILLRYIKYYNSKIFLVNTGWNGKR----ERYSLEYTRSIINAILDDKIEFIDENYIPIFNLKIPKKIEGVP 489          
The following BLAST results are available for this feature:
BLAST of EY720529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_COXBN4.294e-3543.43Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiell... [more]
PCKA_COXB14.294e-3543.43Phosphoenolpyruvate carboxykinase [ATP] OS=Coxiell... [more]
PCKA_BAUCH6.200e-3442.93Phosphoenolpyruvate carboxykinase [ATP] OS=Baumann... [more]
PCKA_WIGBR2.880e-3139.89Phosphoenolpyruvate carboxykinase [ATP] OS=Wiggles... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720529 ID=EY720529; Name=EY720529; organism=Citrus sinensis; type=EST; length=894bp
CCGTCCGGGAGCCTGATATCTGGAATGCCATCAGTTTGGCGCTGTGTTGG
AAAATGTTGTGTGTGATGAGCATACCAGAGAGGTGGATTATTCTGACAAA
TCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATATCCCCAA
TGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCCTTTTGG
CATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAACCTGGCA
CAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGCTGGAAC
AGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCTTTGGTG
CAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTGGCTGAG
AAGATGCAGAAGCATGGTGCTACAGGATGGGCTCGTCACACTGGATGGTC
AGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACACTCGAA
AATCATTGGATGCGATACAGTCTGGCAGCCTGGTGGAATGCAATTACAAG
AAACTGATGTATTTGGGGGTGGAAATCCCGCCAGAGTCCAGGGGAGTGCC
TTCACAAGTCGCGATCGCCAGAAGGTTGGGGACGACAGCAGGCGTGCGAG
GAGACAGGCTTAACGTGAGGGGTTTTTAGGAGGAACTCGCAAATAGCGAC
CCGGCAGAGAATTCCGGGGAACAAAAAGTGGAGAAAAAGACCTGGAGGTC
GTCCTAAGGCTGGGGTGGACGAGGCAAAGAAGCCGGACAACTGCGGGGGC
GGCGCACAAAAGGGGCCCGGACCCCCACCCTGCGCTCGTACCTCATTCGA
GACGCCGATTTTTAGAAAAGTGGTTGATACACCGAGGGGGAGCG
back to top