EY720461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROM1 (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain NATL1A) GN=ndhM PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17 Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L C TRHVRI+ A ++ D LTL +DP EF W+D+S KV YF+ELV+ L++YTLR IGS LE + GE+ YN RV+N+SMG PR Sbjct: 6 LKCTTRHVRIFTAVVENNDLILDNGH---LTLDIDPDNEFSWSDQSIKKVQDYFRELVELQADNELSDYTLRKIGSLLEDFIRKLLKDGELSYNPNSRVMNYSMGLPR 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PAUCH (NAD(P)H-quinone oxidoreductase subunit M, organellar chromatophore OS=Paulinella chromatophora GN=ndhM PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRH+RI+ A ++ D +Q LTL +DP EF+W + K+ + F+ELV+ + GA LT+YTLR IG++LE S GE+ YN RVLN+SMG PR Sbjct: 6 LKSTTRHIRIFTARVENNDLIADTSQ---LTLDIDPDNEFLWEQSTIEKIQSRFKELVECHTGADLTDYTLRRIGTELEGTLFSLLQAGELSYNPNARVLNYSMGLPR 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROM3 (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhM PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17 Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L C TRHVRI+ A ++ D D+LTL LDP EF+WT+ ++ F ELV + G L++Y LR IGS+LE G++ YN CRVLN+SMG PR Sbjct: 6 LKCTTRHVRIFTARVENNDLVPDP---DQLTLDLDPDNEFLWTESVIKEIQQRFAELVASHAGGELSDYNLRKIGSELEGTIRKLLQAGKLSYNPECRVLNYSMGLPR 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROMS (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain AS9601) GN=ndhM PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17 Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRHVRI+ A + E +F +KLTL LDP EF+W ++S NK+ F EL+ G L +Y LR IGS++E G++ YN CRV+N+SMG P+ Sbjct: 6 LKSTTRHVRIFTAEVVDEELKFHP---NKLTLDLDPDNEFIWNEDSLNKINEKFNELIKERAGKDLDDYELRKIGSEIEGLIKFLLQNGQLSYNPDCRVMNYSMGLPK 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROMM (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhM PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17 Identity = 48/108 (44.44%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L C TRHVRI+ A ++ D Q LTL LDP EF+WT+ ++ F ELV + G L++Y LR IGS+LE G++ YN CRVLN+SMG PR Sbjct: 6 LKCTTRHVRIFTARVENNDLVPDPNQ---LTLDLDPDNEFLWTESVTKEIQQRFAELVASHAGGELSDYNLRRIGSELEGTIRKLLQAGKLSYNPECRVLNYSMGLPR 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROM2 (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain MIT 9215) GN=ndhM PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRHVRI+ A + + +F +KLTL LDP EF+W ++S K+ F+EL++ G L +Y LR IGS++E GE+ YN CRV+N+SMG P+ Sbjct: 6 LKSTTRHVRIFTAEVVDKELQFHP---NKLTLDLDPDNEFIWNEDSLKKINQKFKELINERAGRDLDDYELRKIGSEVEGLIKFLLQNGELSYNPDCRVMNYSMGLPK 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROM9 (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain MIT 9312) GN=ndhM PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.361e-16 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRHVRI+ A + +F +KLTL LDP EF+W ++S N++ F EL+ G L +Y LR IGS++E G++ YN CRV+N+SMG P+ Sbjct: 6 LKSTTRHVRIFTAEVVDNELQFHP---NKLTLDLDPDNEFIWNEDSLNEINKKFNELIKERAGKDLDDYELRKIGSEIEGLIKILLQNGQLSYNPDCRVMNYSMGLPK 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PROM0 (NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus (strain MIT 9301) GN=ndhM PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16 Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKP 723 L TRHVRI+ A + E +F +KLTL LDP EF+W ++S NK+ F L+ G L +Y LR IGS++E G++ YN CRV+N+SMG P Sbjct: 6 LKSTTRHVRIFTAEVVDEELKFHP---NKLTLDLDPDNEFIWNEDSLNKINEKFNGLIKERAGKDLDDYELRKIGSEIEGLIKFLLQNGQLSYNPDCRVMNYSMGLP 109
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_SYNS3 (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. (strain CC9311) GN=ndhM PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRHVR++ A ++ D Q LTL LDP EF+W D V F+ELV+ + G L +Y LR IGS+LE G++ YN CRVLN+SMG PR Sbjct: 6 LKSTTRHVRLFTARVNEGRLVPDPNQ---LTLDLDPDNEFLWNDSCIQTVQQRFRELVEAHAGQPLNDYNLRRIGSELEGSIRQLLQAGQLSYNPDCRVLNYSMGLPR 110
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_SYNPW (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. (strain WH7803) GN=ndhM PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPR 726 L TRH+R++ A ++ D Q LTL LDP EF+WT+ + + F++LV+ Y G L +Y LR IG++LE G + YN CRV+N+SMG PR Sbjct: 6 LKSTTRHIRLFTARVENGDLVPDPEQ---LTLDLDPDNEFLWTEGTVTTIQTRFRDLVESYAGQPLNDYNLRRIGTELEGSIRELLQAGSLTYNPDCRVMNYSMGLPR 110 The following BLAST results are available for this feature:
BLAST of EY720461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720461 ID=EY720461; Name=EY720461; organism=Citrus sinensis; type=EST; length=882bpback to top |