EY720438

Overview
NameEY720438
Unique NameEY720438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX1_MACMU (Interferon-induced GTP-binding protein Mx1 OS=Macaca mulatta GN=MX1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.313e-33
Identity = 85/250 (34.00%), Postives = 144/250 (57.60%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDR 828
            D S V KEI    + + G+   IS   I L I S +V +LTLIDLPG+T+VAV  QP  I   I++++R Y+++  ++ L + P+N DIAT++A+ +A+EVDP G+RT G+LTK DL+DKGT    +DV+    + L+  ++ +  R Q +I   + +  A ++E+ +F   P +  L   GK     LA+ L+  L + I   +P + + I +S + +  E+   G  I  D   +++ +++   AF++
Sbjct:  135 DASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPPDIGYKIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFEDHPHFRDLLEEGKATIPCLAEKLTSELIAHICKSLPLLENQIKESHQGITEELQKYGVDIPEDENEKMFFLIDKINAFNQ 384          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX2_HUMAN (Interferon-induced GTP-binding protein Mx2 OS=Homo sapiens GN=MX2 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 85/260 (32.69%), Postives = 146/260 (56.15%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFRSIWMEGD 858
            D   V KEI    + + G  + IS   I L I SP V +LT+IDLPG+T+VAV+ QP  I   I+++++ Y+++  ++ L + P N DIAT++A+ +A EVDP G+RT G+LTK DLMD+GT  + ++V+   +Y L+  ++ +  R Q +I   + +  A +KE  +F T P +  L   G      LA+ L+  L   I+  +P +   I +S ++   E+   G  I      +++ ++E  + F++    + +EG+
Sbjct:  182 DPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRCGADIPSQEADKMFFLIEKIKMFNQDIEKL-VEGE 440          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 85/261 (32.57%), Postives = 151/261 (57.85%), Query Frame = 1
Query:   88 TDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFRSIWMEGD 858
            +D S V KEI    + + G+   IS   I L I S +V +LTLIDLPG+T+VAV  QP  I   I+++++ Y+++  ++ L + P+N DIAT++A+ +A+EVDP G+RT G+LTK DL+DKGT    +DV+    + L+  ++ +  R Q +I   + +  A ++E+ +F   P +  L   GK     LA+ L+  L + I   +P + + I ++ + +  E+   G  I  D   +++ +++   AF++   ++ M+G+
Sbjct:  134 SDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQKYGVDIPEDENEKMFFLIDKVNAFNQDITAL-MQGE 393          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 83/251 (33.07%), Postives = 145/251 (57.77%), Query Frame = 1
Query:   88 TDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDR 828
            +D S V KEI    + + G+   IS   I L I S +V +LTLIDLPG+T+VAV  QP  I   I+++++ Y+++  ++ L + P+N DIAT++A+ +A+EVDP G+RT G+LTK DL+DKGT    +DV+    + L+  ++ +  R Q +I   + +  A ++E+ +F   P +  L   GK     LA+ L+  L + I   +P + + I +S + +  E+   G  +  D   +++ +++   AF++
Sbjct:  134 SDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFEDHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIRESHQRITEELQKYGVDVPEDENEKMFFLIDKINAFNQ 384          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.988e-33
Identity = 84/274 (30.66%), Postives = 149/274 (54.38%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAF 822
            L++ +  +G + Y +  ++  +    D + V K+I++  +++ G    IS   I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ ++ K  ++ L + P N DIAT++A+ +A+ VDP GERT G+LTK DL+DKGT    +D++      L+  ++ +  R Q +I   + +  A  +E+ +F     +  L   G      LA+ L+  L   I   +P +   I K + E + E++  G     D   +L  +++   AF
Sbjct:   72 LKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGTEETVVDIVHNEVIHLKKGYMIVKCRGQKEITEKVSLTEAIEREKAFFNDHVFFHTLYNDGHATVPKLAEKLTLELVHHIEKSLPRLEEQIEKKLIETQVELNKYGNGPPPDTSERLGFLIDRVTAF 345          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.988e-33
Identity = 93/287 (32.40%), Postives = 155/287 (54.01%), Query Frame = 1
Query:   13 VLQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLA--GKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFRSIWMEGD 858
            VL+L K   G +   +  +   +   +D S V + I    + + G    IS   I L + SP+V +LTLIDLPG+T+VAV  QP  I   I+ ++ +Y++K  ++ L + P+N DIAT++A+ +A++VDP G+RT G+LTK DL+D+GT    +DV+      L+  ++ +  R Q DI   + +  A +KE+ +F   P +  L   GK     LA+ L+  L S I   +P + + I +S +    E+   G  I  D   +   ++E   AF++   +I +EG+
Sbjct:  106 VLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQKVDPDGDRTIGILTKPDLVDRGTEDKVVDVVRNLVCHLKKGYMIVKCRGQQDIQEQLSLAEALQKEQVFFKEHPQFRALLEDGKATVPCLAERLTMELISHICKSLPLLENQIKESHQSTSEELQKYGADIPEDENEKTLFLIEKINAFNQDITAI-VEGE 391          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX1_ICTPU (Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus GN=mx1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.451e-32
Identity = 84/267 (31.46%), Postives = 146/267 (54.68%), Query Frame = 1
Query:   34 EDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAF 822
            +D  ++Y E +  P       + V K+I++  D + G    IS   I L + S +V +LTLIDLPG+ +VAV+GQP+ I E I+ +++ ++ K  ++ L + P+N DIAT++A+K+A+EVDP GERT G+LTK DL+DKGT    + ++      L   ++ +  R Q +I   + +  A  KE+++F   P +  L   G      LA+ L+  L   I   +P +   I+  + + ++E+D  G     +   ++  +++   AF
Sbjct:   92 KDHDEDYEEEIQNP-------ADVEKKIREAQDHMAGVGVGISDELISLEVTSADVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIKKFITKQETINLVVVPSNVDIATTEALKMAQEVDPNGERTLGILTKPDLVDKGTEETVVSIIHNEIIYLTKGYMIVRCRGQKEIMDRVSLHEATEKEKDFFKDHPHFSTLYEEGMATIPNLAEKLTLELVHHIELSLPRLEEQIDIKLADSQAELDRYGSGPPTEPAERICFLIDKVTAF 351          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 87/278 (31.29%), Postives = 151/278 (54.32%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKE----RE--YFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAF 822
            L++ + ++G + Y +  +   +    D + V K+I++  D + G    IS   I L I SP V +LTLIDLPG+ +VAV+GQP+ I + I+ ++++++ K  ++ L + P N DIAT++A+ +A+ VDP GERT G+LTK DL+DKGT    ++++      L+  ++ +  R Q +I   + +  A  +E    RE  YF T  + GH      +E L   L  H+E      +P +   I + + +  +E++  G     DA  +L  +++   AF
Sbjct:   72 LKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGTEDTVVEIVHNEVIHLKKGYMIVKCRGQKEITERVSLTEAIERETAFFREHVYFHTLYNEGHATVPKLAEKLTLELVHHIE----KSLPRLEEQIEEKLTQTRAELERYGNGPPSDAAEKLIFLIDKVTAF 345          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 82/250 (32.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGTN--ALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDR 828
            D S V +EI+   D + G    IS   I L + SP V +LTLIDLPG+T+VAV  QP  I   I++++R Y+++  ++ L + P N DIAT++A+++A+EVDP G+RT G+LTK DL+D G     L+V++  +Y L+  ++ +  R Q +I   + +  A ++E  +F + P +  L   GK     LA+ L+  L   I   +P + S I +  +    E+   G  +  +   +++ ++E  + F++
Sbjct:  178 DPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDTGAEKVVLNVMQNLTYHLKKGYMIVKCRGQQEILNKLSLAEATKREIAFFHSHPHFRILLEEGKATVPRLAERLTVELIGHISKSLPLLFSQIKEIHQSATEELRLCGASVPSNDADKMFFLIEKIKVFNQ 427          
BLAST of EY720438 vs. ExPASy Swiss-Prot
Match: MX2_BUBBU (Interferon-induced GTP-binding protein Mx2 OS=Bubalus bubalis GN=MX2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 87/250 (34.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query:   97 SMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIAT---SDAMKLAREVDPTGERTFGVLTKLDLMDKGT--NALDVLEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHL--AGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFD 825
            S V  EI+   + + G  + IS   I+L + SP+V +LTLIDLPG+T+VAVE QP  I   I++++   +++  ++ L + P N DIAT   ++A+ +A+EVDP G+RT G+LTK DL+DKGT    L V++  +Y L+  ++ +  R Q DI   + +  A RKE  +F T P +  L   GK     LA+ L+  L   I   +P + + I +  +    E+   G  I  D G +++ ++E  + F+
Sbjct:  180 SEVEWEIRRAQNIIAGNGRGISHELINLEVTSPDVPDLTLIDLPGITRVAVENQPQDIGLQIKALI---IQRQETINLVVVPCNVDIATKKYTEALSMAQEVDPDGDRTIGILTKPDLVDKGTEKGVLKVMQNLTYHLKKGYMIVKCRGQQDITNKLSLAEATRKETMFFETHPYFRVLLDEGKATMPLLAERLTTELIWHINKSLPLLENQIKEKHQRATEELQQYGDDIPSDEGDKMFFLIEKIKVFN 426          
The following BLAST results are available for this feature:
BLAST of EY720438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
MX1_MACMU1.313e-3334.00Interferon-induced GTP-binding protein Mx1 OS=Maca... [more]
MX2_HUMAN1.714e-3332.69Interferon-induced GTP-binding protein Mx2 OS=Homo... [more]
MX1_HUMAN2.239e-3332.57Interferon-induced GTP-binding protein Mx1 OS=Homo... [more]
MX1_PONAB2.924e-3333.07Interferon-induced GTP-binding protein Mx1 OS=Pong... [more]
MX_DICLA4.988e-3330.66Interferon-induced GTP-binding protein Mx OS=Dicen... [more]
MX2_RAT4.988e-3332.40Interferon-induced GTP-binding protein Mx2 OS=Ratt... [more]
MX1_ICTPU1.451e-3231.46Interferon-induced GTP-binding protein Mx1 OS=Icta... [more]
MX_SINCH1.895e-3231.29Interferon-induced GTP-binding protein Mx OS=Sinip... [more]
MX2_PIG1.895e-3232.80Interferon-induced GTP-binding protein Mx2 OS=Sus ... [more]
MX2_BUBBU2.475e-3234.80Interferon-induced GTP-binding protein Mx2 OS=Buba... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-E04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720438 ID=EY720438; Name=EY720438; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGGTACTGCAGCTTCACAAGACAGAAGATGGTTCACAGGA
GTATGCTGAGTTTCTTCACTTGCCTAAAAGACGATTCACTGATTTCTCCA
TGGTTCGTAAGGAAATTCAGGATGAGACTGATAGGGTAACTGGGAAGACG
AAACAAATTTCTCCGATACCTATCCATCTTAGCATCTACTCTCCAAATGT
TGTCAACTTAACCCTGATCGATTTACCTGGTCTGACCAAAGTCGCTGTTG
AGGGACAACCCGATACTATTGTCGAAGACATTGAATCCATGGTGCGATCT
TATGTTGAGAAGCCTAATTCCGTCATATTAGCAATATCTCCAGCCAATCA
AGATATTGCAACTTCTGATGCAATGAAGCTCGCAAGAGAAGTGGATCCCA
CTGGTGAACGGACATTTGGGGTGTTGACGAAGCTGGATTTGATGGACAAA
GGAACCAATGCATTGGATGTGCTAGAAGGAAGATCTTATCGACTACAACA
TCCTTGGGTTGGAATTGTGAACCGCTCCCAAGCTGATATAAACAGAAACA
TTGACATGATCGTTGCAAGGCGCAAGGAGCGTGAGTACTTTGCTACCAGT
CCGGACTATGGACACTTAGCCGGCAAAATGGGTTCAGAGTATCTTGCAAA
GCTTCTGTCAAAGCACTTGGAATCTGTAATTAGGTCTCGGATACCAAGCA
TCACTTCCTTAATAAACAAAAGCATTGAAGAACTTGAATCTGAGATGGAC
CATCTTGGTCGGCCTATTGCTGTTGATGCTGGGGCTCAACTATACACGAT
TTTGGAACTATGCCGAGCATTTGACCGGATATTCAGGAGCATCTGGATGG
AGGGCGACCTGNAAG
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