FC923085

Overview
NameFC923085
Unique NameFC923085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 3
Query:   39 LSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            L + + G +MP++GLG    K D+ V    + EAIKLGYR FD A +YG E+ +GE I +A+  GL+ +R+D+F+ +KLW N  H D V  ALKK+L
Sbjct:    4 LVTLNNGLKMPLVGLGCW--KIDKKVCANQIYEAIKLGYRLFDGACDYGNEKEVGEGIRKAISEGLV-SRKDIFVVSKLWNNFHHPDHVKLALKKTL 97          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3
Query:   51 SAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            S G+ MP +GLGT   K     +K AV+ A+  GYRH D A+ Y  ER +GEA+ E L  G    R D+F+T+KLW    H D V  A ++SL
Sbjct:    8 STGQRMPTVGLGTW--KSAPGQVKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSL 98          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 3
Query:   51 SAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            S GR+MP++GLGT   K +  ++K AV+ A++ GYRH D A  Y  E  +GEA  E +       R+D+F+T+KLW    H D V P+L K+L+
Sbjct:    8 STGRKMPLLGLGTW--KSEPGLVKQAVIWALESGYRHIDCAPIYANEPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLK 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G+++P+IGLGT   K +   +K AV  A+ +GYRH D A+ Y  E  +G+A  E +    +  R+DLF+T+KLW    H + V PAL+K+L
Sbjct:   13 GQKIPLIGLGTW--KSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTL 101          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   33 VKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            V+  +   G++MP+IGLGT   K     +K AV  A+ +GYRH D A  YG E  +GEAI E++       R+++F+T+KLW N  H D V  AL+K+L+
Sbjct:    5 VEYETLYTGQKMPLIGLGTW--KSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQ 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:   33 VKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            V+  +   G+++P+IGLGT   K     +K AV  A+ +GYRH D A  YG E  +GEAI E++      +R+++F+T+KLW N  H D V  AL+K+L+
Sbjct:    5 VEYETLYTGQKIPLIGLGTW--KSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQ 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 3
Query:   24 VPGVKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            +P +KL+S   G EMP++G G    K +       +  AIK GYR FD A +YG E+ +GE I+ A+K GL+  R++LFIT+KLW N      V  AL K+L
Sbjct:    7 IPTIKLNS---GYEMPLVGFGCW--KVNNETAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLV-KREELFITSKLWNNFHDPKNVETALNKTL 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR*YWSSFF 353
            GR++P IG+G     K EN     V  AIK GYR FD A +YG E+ +GE I+ A+K GL+  R+DLFIT+KLW N   ++ V  AL KSL  +   +F
Sbjct:   11 GRKIPAIGMGCW---KLENAADM-VYAAIKEGYRLFDCACDYGNEKEVGEGINRAIKDGLV-KRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYF 104          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 3
Query:   24 VPGVKLSSASAGREMPVIGLG-------TAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            +P +KL+S   G EMP++G G       TA D+         +  AIK GYR FD A +YG E+ +GE I+ A+K GL+  R++LFIT+KLW N      V  AL K+L
Sbjct:    7 IPTIKLNS---GYEMPLVGFGCWKVTNATAADQ---------IYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLV-KREELFITSKLWNNFHDPKNVETALNKTL 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEA----IKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            G  +P +G GT    K + V K   +EA    + +GYRH DTA  Y  E  +G+AI   +K G++  R+DLFITTKLW      +LV PAL+KSL+
Sbjct:   13 GHLIPALGFGTY---KPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVK-REDLFITTKLWCTCFRPELVKPALEKSLK 104          
The following BLAST results are available for this feature:
BLAST of FC923085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
GRE3_YEAST3.328e-1446.39NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
A1A1A_DANRE2.817e-1344.09Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
A1A1B_DANRE4.806e-1342.55Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
AK1A1_CHICK1.071e-1241.76Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
AK1A1_XENLA1.826e-1242.00Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_XENTR2.385e-1241.00Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
XYL2_CANTR3.115e-1243.14NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
XYL1_PACTA6.939e-1246.46NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
XYL1_CANTR6.939e-1242.20NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
AK1CD_MOUSE6.939e-1243.75Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BH05RM1 SLH Citrus sinensis cDNA clone KN0AAM3BH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923085 ID=FC923085; Name=FC923085; organism=Citrus sinensis; type=EST; length=670bp
AACAGATGCCTGTTTACATCAACGTCCCAGGAGTGAAACTGAGCTCTGCC
TCCGCTGGGCGGGAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAA
GAAGGATGAAAATGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCG
GTTACAGACACTTTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTT
GGAGAAGCAATCGATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCA
AGACCTCTTCATTACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACC
TCGTTGTCCCAGCTTTGAAGAAGTCTCTTAGGTAGTACTGGTCCTCATTT
TTTTTAAATAAGTTATATGATTTAATAGTTTGTGCCGACACATTATTAAA
TTATATAACGTTATAATAAATGATTTAATTTTTTAACTTTATTTACTTAA
AACATTAATAAAACTATTCAGCACTAATTTTAAATGATTTAACATGTACT
TACAACAATATAATTAAGTTAAGTTGTAAAAACATTATTTAATATAGTTT
TAATTATTAATTTTTTAGTCATTTATGTTCAATATTGAATTTCACACCTA
AAATAACTTGGAATGAGAATATAATAAAAAAATTATATTCCATAGATACT
ACCAAAAAAAAAAAAAAAAA
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