FC923085

Overview
NameFC923085
Unique NameFC923085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVP-ALKKSLR 332
            G ++P IGLGT    KDE   K AV  A+K GYRH DTA  YG E+ +GE I E+        R D+++T+KLW N AHR  +VP AL+K+L+
Sbjct:   20 GDKIPSIGLGTWRSGKDET--KNAVCAALKAGYRHIDTAHIYGNEKEIGEGIRES-----GVPRTDIWVTSKLWCN-AHRAGLVPLALEKTLQ 104          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   27 PGVKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR*YWSSFF 353
            P +KL+S   G +MP +G G  + K D  V    V  AIK GYR FD A +YG E+  GE +  A+K GL+  R+DLFI +KLW      D V P  ++ L  +   +F
Sbjct:    4 PTLKLNS---GYDMPQVGFG--LWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLV-KREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYF 106          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11
Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 3
Query:   24 VPGVKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            +P +KL+S   G +MP +G G    K D +     +  AIK GYR FD A +Y  E+ +G  + +A+  G++  R+DLF+T+KLW N  H D V  AL ++L
Sbjct:    1 MPSIKLNS---GYDMPAVGFGCW--KVDVDTCSEQIYRAIKTGYRLFDGAEDYANEKLVGAGVKKAIDEGIV-KREDLFLTSKLWNNYHHPDNVEKALNRTL 96          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 3
Query:   24 VPGVKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            +P  KL++   G EMP IG G    K D++     V  AIK GYR FD A +YG E+ +GE +  A+  G++ TR+++F+T+KLW N      V  AL K+L+
Sbjct:    6 IPAFKLNN---GLEMPSIGFGCW--KLDKSTAADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIV-TREEIFLTSKLWNNYHDPKNVETALNKTLK 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11
Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = 3
Query:   54 AGREMPVIGLGTAVDKKDE-NVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            +G  MP +GLGT     D  + ++ A+ EA   GYRH DTA+EYG E+ +G+ +  A++ G+   R+DLF+T+K+W  +   + V PAL+ +L+
Sbjct:   20 SGHAMPAVGLGTWRAGSDTAHSVRTAITEA---GYRHVDTAAEYGVEKEVGKGLKAAMEAGI--DRKDLFVTSKIWCTNLAPERVRPALENTLK 108          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G +MP++GLG    K   +V    + EAIK+GYR FD A +Y  E+ +G+ ++ A+K GL+  R+DL + +KLW +  H D V  AL+++L
Sbjct:   13 GEKMPLVGLGCW--KMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLV-KREDLVVVSKLWNSFHHPDNVPRALERTL 100          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 3
Query:   45 SASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLW 278
            S + G  +P +GLGTA   +     K AV  AIK GYRH DTA  Y TE  +GEAI E L+ G +  R+DLFITTK+W
Sbjct:   26 SLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSI-KREDLFITTKVW 102          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 3
Query:   36 KLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLW 278
            K    + G+E+P +GLGT    +DE V++ A+  A+ LGYRH DTA  YG E+ +G  + +    G++  R+DLFIT+KLW
Sbjct:    4 KTQKLNNGKEIPTVGLGTW-GMEDEAVLEGAIRNALSLGYRHIDTAFIYGNEKMIGNILKKLFDEGVV-QRKDLFITSKLW 82          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 3
Query:   72 VIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            +IGLGT   K +   +K A+  A+ +GYRH D A+ YG E  +GEA+ E +  G    R++LF+T+KLW    H + V  AL+K+L
Sbjct:    1 LIGLGTW--KSNPGQVKAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTL 84          
The following BLAST results are available for this feature:
BLAST of FC923085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
YBN4_SCHPO9.063e-1248.39Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
XYL1_TRIRE2.019e-1140.37NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
XYL1_PICST2.019e-1139.22NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
XYL1_CANSH2.019e-1140.78NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
ALDR_HORVU2.019e-1139.36Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
XYL1_KLULA2.637e-1140.66NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
ARA1_YEAST3.444e-1151.28D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
ALDR_ENCCU3.444e-1143.21Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]
AK1A1_CRIGR5.874e-1141.86Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BH05RM1 SLH Citrus sinensis cDNA clone KN0AAM3BH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923085 ID=FC923085; Name=FC923085; organism=Citrus sinensis; type=EST; length=670bp
AACAGATGCCTGTTTACATCAACGTCCCAGGAGTGAAACTGAGCTCTGCC
TCCGCTGGGCGGGAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAA
GAAGGATGAAAATGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCG
GTTACAGACACTTTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTT
GGAGAAGCAATCGATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCA
AGACCTCTTCATTACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACC
TCGTTGTCCCAGCTTTGAAGAAGTCTCTTAGGTAGTACTGGTCCTCATTT
TTTTTAAATAAGTTATATGATTTAATAGTTTGTGCCGACACATTATTAAA
TTATATAACGTTATAATAAATGATTTAATTTTTTAACTTTATTTACTTAA
AACATTAATAAAACTATTCAGCACTAATTTTAAATGATTTAACATGTACT
TACAACAATATAATTAAGTTAAGTTGTAAAAACATTATTTAATATAGTTT
TAATTATTAATTTTTTAGTCATTTATGTTCAATATTGAATTTCACACCTA
AAATAACTTGGAATGAGAATATAATAAAAAAATTATATTCCATAGATACT
ACCAAAAAAAAAAAAAAAAA
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