EY720356

Overview
NameEY720356
Unique NameEY720356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 5.107e-42
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 1
Query:   28 KTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGTNALDVLXGRSYRLQHPWV 510
            K ++ S E+ EFLHLP ++F +F  +R+EI  ET+  TGK   IS +PI+L IYSP+V+ LTL+DLPGLTKV V  QP  I + I  MV  Y+ K N++ILA++ AN D+A SD +KLAREVDP G RT GVLTK+DLM +GT+ +D+L GR   L+  +V
Sbjct:   89 KDQNNSSEWGEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMVLKYISKNNAIILAVNAANTDLANSDGLKLAREVDPEGLRTIGVLTKVDLMDKGTDVVDILAGRVIPLRLGYV 249          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.338e-40
Identity = 82/172 (47.67%), Postives = 125/172 (72.67%), Query Frame = 1
Query:    4 RVRVLQLHKTEDGS--QEYAEFLHL-PKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGTNALDVLXGRSYRLQHPWV 510
            R++++Q   + DG   +E+ EFLH  P RR  DFS +R+EI+ ET+RV+G+ K +S IPI L I+SPNV++++L+DLPG+TKV V  QP  I   I +M+ +Y+++P+ +ILA+SPAN D+A SDA+++A   DP G RT GV+TKLD+M +GT+A + L G++  L+  +V
Sbjct:   82 RLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITKVPVGDQPSDIEARIRTMILTYIKEPSCLILAVSPANTDLANSDALQIAGNADPDGHRTIGVITKLDIMDRGTDARNHLLGKTIPLRLGYV 253          

HSP 2 Score: 25.409 bits (54), Expect = 1.338e-40
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 2
Query:  503 LGF-GIVNRSQADI--NRNI-DMIVARRK 577
            LG+ G+VNRSQ DI  NR+I D +VA  K
Sbjct:  250 LGYVGVVNRSQEDILMNRSIKDALVAEEK 278          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.302e-37
Identity = 82/174 (47.13%), Postives = 117/174 (67.24%), Query Frame = 1
Query:    4 RVRVLQLHKTED-----GSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGTNALDVLXGRSYRLQHPWV 510
            R  VLQL +T+         E+ EF HLP+ RF DFS +R+EI+ ET+R+ G+ K ++   I L I SPNV+N+TL+DLPG+TKV V  QP  I   I +M+ SY+++   +ILA++PAN D+A SDA+++A  VDP G RT GV+TKLD+M +GT+A  +L G    L+  +V
Sbjct:   95 RPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITKVPVGDQPSDIEARIRTMILSYIKQDTCLILAVTPANTDLANSDALQIASIVDPDGHRTIGVITKLDIMDKGTDARKLLLGNVVPLRLGYV 268          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.763e-26
Identity = 60/148 (40.54%), Postives = 100/148 (67.57%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT 456
            L++ + ++G + Y +  +   ++   D + V K+I+D  D + G    IS   I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ ++++  ++ L + P N DIAT++A+K+A+EVDP GERT G+LTK DL+ +GT
Sbjct:   74 LKMKRRQEGEEWYGKISYQDCEKEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFIKRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGT 221          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.928e-26
Identity = 62/148 (41.89%), Postives = 98/148 (66.22%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT 456
            L++ + ++G + + +  +   +    D S V K+I++  D + G    IS   I L I SP+V +LTLIDLPG+ +VAV+GQP+ I E I+ ++R ++ K  ++ L + P N DIAT++A+K+A+EVDP GERT G+LTK DL+ +GT
Sbjct:   73 LKMKRKKEGEEWHGKISYQDHEEEIEDPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIRKFIMKQETISLVVVPCNVDIATTEALKMAQEVDPEGERTLGILTKPDLVDKGT 220          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.752e-26
Identity = 63/141 (44.68%), Postives = 93/141 (65.96%), Query Frame = 1
Query:   82 RFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT--NALDVLXGRSYRLQ 498
            +F D S V KEI+   + + G+   IS   I L I SP V +LTLIDLPG+T+VAV  QP  I   I++++++Y++K  ++ L + P N DIAT++A+ +A+EVDP G+RT GVLTK DL+ +GT    ++V    +Y LQ
Sbjct:  179 QFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMAQEVDPNGDRTIGVLTKPDLVDRGTEKTVVNVAQNLTYHLQ 319          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.546e-25
Identity = 66/165 (40.00%), Postives = 102/165 (61.82%), Query Frame = 1
Query:   13 VLQLHKTEDGSQEYAEFLHLPKR-RFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT--NALDVLXGRSYRLQ 498
            VL+L K E   +   +   L +    +D S V KEI +    + G+   IS   I L + SP+V +LTLIDLPG+T+VAV  QP  I   I+S++R Y+ +  ++ L + PAN DIAT++A+++A++VDP G+RT G+LTK DL+ +GT    +DV+    + L+
Sbjct:  103 VLRLKKLEKEGEWKGKVSFLDREIEISDASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQDVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLK 267          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.326e-25
Identity = 57/148 (38.51%), Postives = 97/148 (65.54%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT 456
            L++ +  +G + Y +  ++  +    D + V K+I++  +++ G    IS   I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ ++ K  ++ L + P N DIAT++A+ +A+ VDP GERT G+LTK DL+ +GT
Sbjct:   72 LKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGT 219          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4)

HSP 1 Score: 115.931 bits (289), Expect = 3.326e-25
Identity = 67/165 (40.61%), Postives = 101/165 (61.21%), Query Frame = 1
Query:   13 VLQLHKTEDGSQEYAEFLHLPKR-RFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT--NALDVLXGRSYRLQ 498
            VL+L K  +  +   +   L K     D S V KEI +    + G+   IS   I L + SP+V +LTLIDLPG+T+VAV  QP  I   I+S++R Y+ +  ++ L + PAN DIAT++A+++A+EVDP G+RT G+LTK DL+ +GT    +DV+    + L+
Sbjct:   97 VLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLK 261          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.343e-25
Identity = 59/148 (39.86%), Postives = 98/148 (66.22%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLP-KRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGT 456
            L++ + ++G + Y +  +   ++   D S V  +I++  D + G    IS   I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ ++ +  ++ L + P N DIAT++A+K+A+EVDP GERT G+LTK DL+ +GT
Sbjct:   72 LKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGT 219          
The following BLAST results are available for this feature:
BLAST of EY720356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
VPS1_SCHPO5.107e-4253.42Vacuolar protein sorting-associated protein 1 OS=S... [more]
DRP3B_ARATH1.338e-4047.67Dynamin-related protein 3B OS=Arabidopsis thaliana... [more]
DRP3A_ARATH1.302e-3747.13Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
MX_PERFL1.763e-2640.54Interferon-induced GTP-binding protein Mx (Fragmen... [more]
MX_ONCMY3.928e-2641.89Interferon-induced GTP-binding protein Mx OS=Oncor... [more]
MX2_CANFA8.752e-2644.68Interferon-induced GTP-binding protein Mx2 OS=Cani... [more]
MX1_SHEEP2.546e-2540.00Interferon-induced GTP-binding protein Mx1 OS=Ovis... [more]
MX_DICLA3.326e-2538.51Interferon-induced GTP-binding protein Mx OS=Dicen... [more]
MX1_BOVIN3.326e-2540.61Interferon-induced GTP-binding protein Mx1 OS=Bos ... [more]
MX_EPICO4.343e-2539.86Interferon-induced GTP-binding protein Mx OS=Epine... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720356 ID=EY720356; Name=EY720356; organism=Citrus sinensis; type=EST; length=940bp
CCACGCGTCCGGGTACTGCAGCTTCACAAGACAGAAGATGGTTCACAGGA
GTATGCTGAGTTTCTTCACTTGCCTAAAAGACGATTCACTGATTTCTCCA
TGGTTCGTAAGGAAATTCAGGATGAGACTGATAGGGTAACTGGGAAGACG
AAACAAATTTCTCCGATACCTATCCATCTTAGCATCTACTCTCCAAATGT
TGTCAACTTAACCCTGATCGATTTACCTGGTCTGACCAAAGTCGCTGTTG
AGGGACAACCCGATACTATTGTCGAAGACATTGAATCCATGGTGCGATCT
TATGTTGAGAAGCCTAATTCCGTCATATTAGCAATATCTCCAGCCAATCA
AGATATTGCAACTTCTGATGCAATGAAGCTCGCAAGAGAAGTGGATCCCA
CTGGTGAACGGACATTTGGGGTGTTGACGAAGCTGGATTTGATGGANCAA
GGAACCAATGCATTGGATGTGCTANAAGGAAGATCTTATCGACTACAACA
TCCTTGGGTTTGGAATTGTGAACCGCTCCCAAGCTGATATAAACAGAAAC
ATTGACATGATCGTTGCAAGGCGCAAGGAGCGTGAGTACTTTGCTACCAG
TTCCGGACTATGGACACCTAGCCGGCAAAATGGGGTCAGAGTATCTTGGC
AACCTTCTGGTCAAACCACTTGGAAATCCGTTATTAGGGCTCCGAATACC
AACCATCCCTTCCTTTAATAAACAAAAGCATTGAAGAAACTTGAATCTGA
AGAGGAACCATCTTGGGTCGGCCTTATTGCTGTTAATTCTCGGGGTCCCA
CGTATGCGCCATTGGGGAAGTATGCCCGAGCTTTGTACCGGGATTTTCAG
GAACCATTTGGTTAGGGGGGGGACCGTCCAGGTAGCTCGTGTGTGTGGAG
TTTGCGACGCCCCGAGGTTCGCGGGGTTGCGCGGGAGCGT
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