EY720235

Overview
NameEY720235
Unique NameEY720235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.035e-56
Identity = 113/210 (53.81%), Postives = 148/210 (70.48%), Query Frame = 1
Query:    7 RVRVLQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            R  VLQL    + + EYAEFLH   ++FTDF  VR EI+ ETDRVTG  K ISP+PI+L +YSP+V+NLTL+DLPG+TKV V  QP  I   I  M+  +V K N +ILA+SPAN D+A SDA+K+A+EVDP G+RT GV+TKLDLMD+G +A DVL  +   L+  ++G+VNRSQ DI+   D+  A   ER++F + P Y HLA + G
Sbjct:   67 RPLVLQL---VNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.922e-56
Identity = 108/195 (55.38%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   52 EYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            EYAEFLH   R+FTDF  VR+EI+ ETDRVTG  K ISP+PI+L IYSP+V+NLTLIDLPG+TKV V  QP  I   I+ M+  ++ + +S+ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  ++G+VNRSQ DI    D+  A   ER++F + P Y H+A + G
Sbjct:   79 EYAEFLHCKSRKFTDFEEVRQEIEAETDRVTGTNKGISPVPINLRIYSPHVLNLTLIDLPGITKVPVGDQPQDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGKKDIRTALAAERKFFLSHPAYRHIADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 7.734e-56
Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 1
Query:    7 RVRVLQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            R  +LQL +  +   EYAEFLH    RF DF  VRKEI+DETDRVTG+ K ISP PI+L ++SPNV+NLTLIDLPGLTKV V  QP  I + I  M+ +++ +   +ILA++PAN D+ATSDA+KLA+EVDP G RT GVLTKLDLMD+G +A ++L  + + L+  +VG+VNR Q DI    D+  A   ER++F + P Y H+A + G
Sbjct:   69 RPLILQLIQDRN---EYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEGTDAREILENKLFTLRRGYVGVVNRGQKDIVGRKDIRAALDAERKFFISHPSYRHMADRLG 275          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.250e-55
Identity = 106/195 (54.36%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   52 EYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            EYAEFLH   ++FTDF  VR+EI+ ETDRVTG  K ISP+PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I+ M+  ++ + +S+ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  ++G+VNRSQ DI    D+  A   ER++F + P Y H+A + G
Sbjct:   79 EYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGRKDIRAALAAERKFFLSHPAYRHMADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 2.250e-55
Identity = 106/195 (54.36%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   52 EYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            EYAEFLH   ++FTDF  VR+EI+ ETDRVTG  K ISP+PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I+ M+  ++ + +S+ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  ++G+VNRSQ DI    D+  A   ER++F + P Y H+A + G
Sbjct:   79 EYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 5.013e-55
Identity = 105/199 (52.76%), Postives = 143/199 (71.86%), Query Frame = 1
Query:   40 DGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            +G  EY EFLH+  ++F+ F  +RKEI+DETDRVTG  K IS IPI+L +YSP+V+NLTLIDLPGLTKVA+  QP  I + I+ M+  ++ K   +ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A D+L  +   L+  ++G+VNRSQ DI    D+  A   ER++F + P Y H+A + G
Sbjct:   70 NGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLG 268          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.551e-55
Identity = 105/195 (53.85%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   52 EYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            E+AEFLH   ++FTDF  VR+EI+ ETDRVTG  K ISP+PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I+ M+  ++ + +S+ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  ++G+VNRSQ DI    D+  A   ER++F + P Y H+A + G
Sbjct:   79 EHAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.134e-54
Identity = 104/196 (53.06%), Postives = 136/196 (69.39%), Query Frame = 1
Query:   25 LHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDY 612
            + +  D  ++YAEFLH+P  +FTD + VR EI++ET RV G  K I+ +PI+L IYS  V+NLTLIDLPGLTK+ V  QP  I     S++  Y+ +PNS+ILA+SPAN DI  S+ +KLAR VDP G+RT GVLTKLDLMD+G NA+D+L GR Y L+  +V  VNRSQ+DI  +  M  A + ER +F   P Y
Sbjct:  104 IEEDSDEIEDYAEFLHIPDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRSLIMEYISRPNSIILAVSPANFDIVNSEGLKLARSVDPKGKRTIGVLTKLDLMDQGTNAMDILSGRVYPLKLGFVATVNRSQSDIVSHKSMRDALQSERSFFEHHPAY 299          

HSP 2 Score: 28.8758 bits (63), Expect = 1.134e-54
Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = 2
Query:  629 KMGSEYLAKLLSKHLESVIRSRIPSI----TSFITKALKNLN 742
            + G+ YLAK LS  L S IR R+P I    ++ I++  + LN
Sbjct:  305 RCGTPYLAKTLSNLLVSHIRERLPDIKARLSTLISQTQQQLN 346          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.459e-54
Identity = 105/214 (49.07%), Postives = 149/214 (69.63%), Query Frame = 1
Query:   31 KTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNGFRVSCKASVQAL 672
            K  + + E+ EFLH+P +RF DF  +++EI++ET R+ GK K IS IPI+L ++SP+V+NLTL+DLPG+TKV +  QP  I + I++++  Y+  PN +ILA+SPAN D+  S+++KLAREVDP G+RT GV+TKLDLMD G NALD+L G+ Y L+  +VG+VNRSQ DI  N  +  +  KE +YF   P Y  ++ + G R   K   Q L
Sbjct:  111 KERNHADEWGEFLHIPGKRFYDFDDIKREIENETARIAGKDKGISKIPINLKVFSPHVLNLTLVDLPGITKVPIGEQPPDIEKQIKNLILDYIATPNCLILAVSPANVDLVNSESLKLAREVDPQGKRTIGVITKLDLMDSGTNALDILSGKMYPLKLGFVGVVNRSQQDIQLNKTVEESLDKEEDYFRKHPVYRTISTKCGTRYLAKLLNQTL 324          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN3_MOUSE (Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.244e-54
Identity = 112/210 (53.33%), Postives = 146/210 (69.52%), Query Frame = 1
Query:    7 RVRVLQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            R  VLQL  ++    EYAEFLH   ++FTDF  VR EI+ ETDRVTG  K IS IPI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I  M+  ++ + N +ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  +VG+VNRSQ DI+   D+  A   ER++F + P Y H+A + G
Sbjct:   67 RPLVLQLVTSK---AEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIADRMG 273          
The following BLAST results are available for this feature:
BLAST of EY720235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DYN1_BOVIN2.035e-5653.81Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1[more]
DYN2_BOVIN5.922e-5655.38Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1[more]
DYN1_CAEEL7.734e-5653.33Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV... [more]
DYN2_RAT2.250e-5554.36Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1[more]
DYN2_MOUSE2.250e-5554.36Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2[more]
DYN_DROME5.013e-5552.76Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=... [more]
DYN2_HUMAN8.551e-5553.85Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2[more]
YB68_SCHPO1.134e-5453.06Dynamin-like protein C12C2.08 OS=Schizosaccharomyc... [more]
DNM1_YEAST1.459e-5449.07Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]
DYN3_MOUSE4.244e-5453.33Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-H03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720235 ID=EY720235; Name=EY720235; organism=Citrus sinensis; type=EST; length=908bp
CACCCACGCGTCCGGGTACTGCAGCTTCACAAGACAGAAGATGGTTCACA
GGAGTATGCTGAGTTTCTTCACTTGCCTAAAAGACGATTCACTGATTTCT
CCATGGTTCGTAAGGAAATTCAGGATGAGACTGATAGGGTAACTGGGAAG
ACGAAACAAATTTCTCCGATACCTATCCATCTTAGCATCTACTCTCCAAA
TGTTGTCAACTTAACCCTGATCGATTTACCTGGTCTGACCAAAGTCGCTG
TTGAGGGACAACCCGATACTATTGTCGAAGACATTGAATCCATGGTGCGA
TCTTATGTTGAGAAGCCTAATTCCGTCATATTAGCAATATCTCCAGCCAA
TCAAGATATTGCAACTTCTGATGCAATGAAGCTCGCAAGAGAAGTGGATC
CCACTGGTGAACGGACATTTGGGGTGTTGACGAAGCTGGATTTGATGGAC
AAAGGGAACAATGCATTGGATGTGCTANAAGGAAGATCTTATCGACTACA
ACATCCTTGGGTTGGAATTGTGAACCGCTCCCAAGCTGATATAAACAGAA
ACATTGACATGATCGTTGCAACGCGCAAGGAGCGTGAGTACTTTGCTACC
AGTCCGGACTATGGACACTTAGCCGGGCAAAATGGGTTCAGAGTATCTTG
CAAAGCTTCTGTCCAAGCACTTGGAATCTGTAATTAGGTCTCGGATACCA
AGCATCACTTCCTTTATAACAAAAGCTTTGAAGAACTTGAATCCGAGATG
GACCTCTTGGTCCGGCTATTGGTGTTGATGCTGGGGCTCAACTATACCCC
ATTTTGGAACTATGCCGAGCATTGACCCGGATTTCCGGGACCTCTGGATG
GGAGGGGACCGGAAGGTGATCCTGTTATGGAGTTTCAAAAACCAGTTCCT
GGTGGTGG
back to top