EY720235

Overview
NameEY720235
Unique NameEY720235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN3_RAT (Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.543e-54
Identity = 111/210 (52.86%), Postives = 146/210 (69.52%), Query Frame = 1
Query:    7 RVRVLQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            R  VLQL  ++    EYAEFLH   ++FTDF  VR EI+ ETDRVTG  K IS +PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I  M+  ++ + N +ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  +VG+VNRSQ DI+   D+  A   ER++F + P Y H+A + G
Sbjct:   67 RPLVLQLVTSK---AEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYN3_HUMAN (Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4)

HSP 1 Score: 211.46 bits (537), Expect = 5.543e-54
Identity = 112/210 (53.33%), Postives = 146/210 (69.52%), Query Frame = 1
Query:    7 RVRVLQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            R  VLQL  ++    EYAEFLH   ++FTDF  VR EI+ ETDRVTG  K IS IPI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I  M+  ++ + N +ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLDLMD+G +A DVL  +   L+  +VG+VNRSQ DI+   D+  A   ER++F + P Y H+A + G
Sbjct:   67 RPLVLQLVTSK---AEYAEFLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIADRMG 273          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 8.004e-53
Identity = 107/211 (50.71%), Postives = 148/211 (70.14%), Query Frame = 1
Query:   10 VRVLQLHKTEDGSQ--EYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            +++  L   +DGSQ  E+ EFLH P   F DFS +R+EI  +TDR+TGK K IS  PI+L IYSP+VVNLTL+DLPG+TKV V  QP  I + I  MV +Y++K N++I+A++PAN D+A SDA++LA+EVDP G+RT GV+TKLDLMDKG +A++VL GR   L   ++G++NRSQ DI     +  + + E  YF   P Y  +A ++G
Sbjct:   65 LQLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIREEIIRDTDRMTGKNKGISAQPINLKIYSPHVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMVMAYIKKQNAIIVAVTPANTDLANSDALQLAKEVDPEGKRTIGVITKLDLMDKGTDAMEVLTGRVIPLTLGFIGVINRSQEDIIAKKSIRESLKSEILYFKNHPIYKSIANRSG 275          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.963e-52
Identity = 105/200 (52.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query:   37 EDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            ++  +E+ EF H    RF +F  +++EI+ ET+R+ G  K IS  PI L IYSP VV LTL+DLPGLT+VA+E QP  I E I+SM+  Y+  PNS+ILAI+PANQDI TSDA+KLA++VDP G+RT GVLTKLDLMDKG +A+D+L G S  L   +VG+VNRSQ DIN    +      E ++F   P Y  +  Q G
Sbjct:  229 DNSLEEWGEFGHTGTNRF-NFQEIKEEIERETERIAGPNKDISSEPIVLKIYSPKVVPLTLVDLPGLTRVAIEDQPPDIEEKIKSMIIDYISNPNSIILAITPANQDIVTSDALKLAQQVDPLGKRTIGVLTKLDLMDKGTDAIDILLGNSIPLSLGFVGVVNRSQQDINNRKPIEQMLADEWKWFDQHPVYHRITNQLG 427          

HSP 2 Score: 26.1794 bits (56), Expect = 2.963e-52
Identity = 12/35 (34.29%), Postives = 22/35 (62.86%), Query Frame = 2
Query:  629 KMGSEYLAKLLSKHLESVIRSRIPSITSFITKALK 733
            ++G++YLA+  +K L   IR   PS+ + I + +K
Sbjct:  425 QLGTKYLAQKCNKILTKHIRDTFPSVKNQIRQLIK 459          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.776e-52
Identity = 98/198 (49.49%), Postives = 136/198 (68.69%), Query Frame = 1
Query:   31 KTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLA 624
            ++ED  +E+ EFLHLP ++F +F  +RKEI  ETD+VTG    IS +PI+L IYSP+V+ LTL+DLPGLTKV V  QP  I   I+ M+  Y+ KPN++IL+++ AN D+A SD +KLAREVDP G RT GVLTK+DLMD+G + +D+L GR   L++ ++ ++NR Q DI     +  A   ER++F   P Y   A
Sbjct:  114 QSEDNKEEWGEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDMLLKYISKPNAIILSVNAANTDLANSDGLKLAREVDPEGTRTIGVLTKVDLMDQGTDVIDILAGRVIPLRYGYIPVINRGQKDIEHKKTIREALENERKFFENHPSYSSKA 311          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.491e-51
Identity = 101/198 (51.01%), Postives = 134/198 (67.68%), Query Frame = 1
Query:   31 KTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLA 624
            K ++ S E+ EFLHLP ++F +F  +R+EI  ET+  TGK   IS +PI+L IYSP+V+ LTL+DLPGLTKV V  QP  I + I  MV  Y+ K N++ILA++ AN D+A SD +KLAREVDP G RT GVLTK+DLMDKG + +D+L GR   L+  +V ++NR Q DI     + +A   ER +F T P YG  A
Sbjct:   89 KDQNNSSEWGEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMVLKYISKNNAIILAVNAANTDLANSDGLKLAREVDPEGLRTIGVLTKVDLMDKGTDVVDILAGRVIPLRLGYVPVINRGQKDIEGKKSIRIALEAERNFFETHPSYGSKA 286          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.845e-49
Identity = 97/197 (49.24%), Postives = 136/197 (69.04%), Query Frame = 1
Query:   46 SQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            ++E+ +FLH   + +TDF  +R+EI++ET+R++G  K +SP PIHL I+SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  ++  PNS+ILA++ AN D+ATS+A+K++REVDP G RT  V+TKLDLMD G +A+DVL GR   ++   +G+VNRSQ DIN    +  + R   EY      Y  LA +NG
Sbjct:   87 AEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRD--EYAFLQKKYPSLANRNG 281          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.845e-49
Identity = 97/197 (49.24%), Postives = 136/197 (69.04%), Query Frame = 1
Query:   46 SQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            ++E+ +FLH   + +TDF  +R+EI++ET+R++G  K +SP PIHL I+SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  ++  PNS+ILA++ AN D+ATS+A+K++REVDP G RT  V+TKLDLMD G +A+DVL GR   ++   +G+VNRSQ DIN    +  + R   EY      Y  LA +NG
Sbjct:  100 AEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRD--EYAFLQKKYPSLANRNG 294          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.410e-49
Identity = 96/197 (48.73%), Postives = 136/197 (69.04%), Query Frame = 1
Query:   46 SQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            ++E+ +FLH   + +TDF  +R+EI++ET+R++G  K +SP PIHL ++SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  ++  PNS+ILA++ AN D+ATS+A+K++REVDP G RT  V+TKLDLMD G +A+DVL GR   ++   +G+VNRSQ DIN    +  + R   EY      Y  LA +NG
Sbjct:  100 AEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRD--EYAFLQKKYPSLANRNG 294          
BLAST of EY720235 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.410e-49
Identity = 96/197 (48.73%), Postives = 136/197 (69.04%), Query Frame = 1
Query:   46 SQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMDKGNNALDVLXGRSYRLQHPWVGIVNRSQADINRNIDMIVATRKEREYFATSPDYGHLAGQNG 636
            ++E+ +FLH   + +TDF  +R+EI++ET+R++G  K +SP PIHL ++SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  ++  PNS+ILA++ AN D+ATS+A+K++REVDP G RT  V+TKLDLMD G +A+DVL GR   ++   +G+VNRSQ DIN    +  + R   EY      Y  LA +NG
Sbjct:   93 AEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRD--EYAFLQKKYPSLANRNG 287          
The following BLAST results are available for this feature:
BLAST of EY720235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DYN3_RAT5.543e-5452.86Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2[more]
DYN3_HUMAN5.543e-5453.33Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4[more]
DYNA_DICDI8.004e-5350.71Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
DYNB_DICDI2.963e-5252.50Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3... [more]
VPS1_YEAST6.776e-5249.49Vacuolar protein sorting-associated protein 1 OS=S... [more]
VPS1_SCHPO7.491e-5151.01Vacuolar protein sorting-associated protein 1 OS=S... [more]
DNM1L_HUMAN1.845e-4949.24Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_BOVIN1.845e-4949.24Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
DNM1L_RAT2.410e-4948.73Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]
DNM1L_MOUSE2.410e-4948.73Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-H03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720235 ID=EY720235; Name=EY720235; organism=Citrus sinensis; type=EST; length=908bp
CACCCACGCGTCCGGGTACTGCAGCTTCACAAGACAGAAGATGGTTCACA
GGAGTATGCTGAGTTTCTTCACTTGCCTAAAAGACGATTCACTGATTTCT
CCATGGTTCGTAAGGAAATTCAGGATGAGACTGATAGGGTAACTGGGAAG
ACGAAACAAATTTCTCCGATACCTATCCATCTTAGCATCTACTCTCCAAA
TGTTGTCAACTTAACCCTGATCGATTTACCTGGTCTGACCAAAGTCGCTG
TTGAGGGACAACCCGATACTATTGTCGAAGACATTGAATCCATGGTGCGA
TCTTATGTTGAGAAGCCTAATTCCGTCATATTAGCAATATCTCCAGCCAA
TCAAGATATTGCAACTTCTGATGCAATGAAGCTCGCAAGAGAAGTGGATC
CCACTGGTGAACGGACATTTGGGGTGTTGACGAAGCTGGATTTGATGGAC
AAAGGGAACAATGCATTGGATGTGCTANAAGGAAGATCTTATCGACTACA
ACATCCTTGGGTTGGAATTGTGAACCGCTCCCAAGCTGATATAAACAGAA
ACATTGACATGATCGTTGCAACGCGCAAGGAGCGTGAGTACTTTGCTACC
AGTCCGGACTATGGACACTTAGCCGGGCAAAATGGGTTCAGAGTATCTTG
CAAAGCTTCTGTCCAAGCACTTGGAATCTGTAATTAGGTCTCGGATACCA
AGCATCACTTCCTTTATAACAAAAGCTTTGAAGAACTTGAATCCGAGATG
GACCTCTTGGTCCGGCTATTGGTGTTGATGCTGGGGCTCAACTATACCCC
ATTTTGGAACTATGCCGAGCATTGACCCGGATTTCCGGGACCTCTGGATG
GGAGGGGACCGGAAGGTGATCCTGTTATGGAGTTTCAAAAACCAGTTCCT
GGTGGTGG
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