EY720212

Overview
NameEY720212
Unique NameEY720212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720212_ssr47 microsatellite EY720212_ssr47:47..58. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.091e-34
Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TTN G  V  +  S+  G +GP L+ED+H  EK+ +FD ERIPERVVHARG    GFF+V   ++  T A FL+ P V+TPV VRFSTV   +G+ +T+RD RGFA +FYT EGN+D  GNN PVFF
Sbjct:   31 TTNQGLRVSEDEHSLKAGVRGPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFF 157          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 144.821 bits (364), Expect = 5.091e-34
Identity = 67/127 (52.76%), Postives = 93/127 (73.23%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TT SG P+ +  + +T GP+GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A        +TP+ VRFSTV  E G+ +T+RDPRGFA +FYT +GN+D  GNN P+FF
Sbjct:   28 TTGSGNPIGDKLNILTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.649e-34
Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TTN G  V  +  S+  G +GP L+ED+H  EK+ +FD ERIPER+VHARG +A G F+V   +   T A FL+ P V+TPV VRFSTV   +G+ ET+RD RGFA +FYT EGN+D  GNN PVFF
Sbjct:   28 TTNQGLKVSEDEFSLKAGERGPTLMEDFHFREKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 6.649e-34
Identity = 67/127 (52.76%), Postives = 93/127 (73.23%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TT  G PV +  + +T+GP+GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A        +TP+ VRFSTV  E G+ +T+RDPRGFA +FYT +GN+D  GNN P+FF
Sbjct:   28 TTGGGNPVSDKLNLLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 6.649e-34
Identity = 72/148 (48.65%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  182 PAMDPYKF--RPASSFNAPFFTTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            PA D  K      ++  A   TT +G PV +  + +T GP+GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A        +TP+ VRFSTV  E G+ +T+RDPRGFA +FYT +GN+D  GNN P+FF
Sbjct:    7 PASDQMKHWKEQRAAQKADVLTTGAGNPVGDKLNVITAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.684e-34
Identity = 71/127 (55.91%), Postives = 93/127 (73.23%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            +TN+G  + +N +++  G +GP LLED+ + EK+ +FD ERIPERVVHARG++A G+FE   D+S+LT A FL     +TPV VRFSTV   RG+ +T+RD RGFA +FYT EGNFD  GNN PVFF
Sbjct:   43 STNTGTRIADNQNTLKAGERGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGYFEAYEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFF 169          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.684e-34
Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF------WP*WNEIPCNGPCA*T*TNVPLPE*MWD 703
            TT  GAPVW++N+ +T GP+GP+LL+    +EKLA FDRERIPERVVHA+G+ A G F VT D++  T A        +T    RFSTV  E+G+ + +RDPRGFA ++YT EGN+D  GNN PVFF      +P +       P     TN+P P+ +WD
Sbjct:    9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQ----TNLPNPDMVWD 165          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.134e-33
Identity = 67/127 (52.76%), Postives = 92/127 (72.44%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TT  G P+ +  + MT GP+GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A        +TP+ VRFSTV  E G+ +T+RDPRGFA +FYT +GN+D  GNN P+FF
Sbjct:   28 TTGGGNPIGDKLNIMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.134e-33
Identity = 67/127 (52.76%), Postives = 92/127 (72.44%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            TT  G P+ +  + MT GP+GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A        +TP+ VRFSTV  E G+ +T+RDPRGFA +FYT +GN+D  GNN P+FF
Sbjct:   28 TTGGGNPIGDKLNVMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of EY720212 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.481e-33
Identity = 70/127 (55.12%), Postives = 92/127 (72.44%), Query Frame = 2
Query:  239 TTNSGAPVWNNNSSMTIGPKGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPRVQTPVIVRFSTVIHERGTPETLRDPRGFAGQFYTREGNFDPGGNNFPVFF 619
            T ++GA V +N +S T G +GP+LL+D  L++KL  FDRERIPERVVHARG   KG F  + D+S+L+ A   ++   +TPV VRFS+V+H   +PETLRDP GFA +FYT +GN+D  GNNFP FF
Sbjct:   31 TRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVFKSGE-KTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFF 156          
The following BLAST results are available for this feature:
BLAST of EY720212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATE_BACSU5.091e-3455.12Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]
CATA_PIG5.091e-3452.76Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATE_BACPF6.649e-3455.12Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATA_RANRU6.649e-3452.76Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_CALJA6.649e-3448.65Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATE_PSEAE8.684e-3455.91Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_HELPJ8.684e-3447.83Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_RAT1.134e-3352.76Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_CANFA1.134e-3352.76Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATB_PSESY1.481e-3355.12Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-F02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720212 ID=EY720212; Name=EY720212; organism=Citrus sinensis; type=EST; length=791bp
CGACCACGCGTCCGATTAGAAGCGCGAGCCACGAGAGTCTGTGTATATAA
ATAAATAATAAGGCAGTAGTATTGCATTCGTGATCACCGGCTTTTGGTTG
CCACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGTAG
CTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATACA
AGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATTCC
GGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAAAGG
TCCAATCCTCCTTGAGGATTATCATCTAGTGGAGAAACTTGCAAATTTTG
ATAGGGAGCGGATTCCAGAACGTGTTGTCCATGCCAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGGTCACCCATGATGTTTCTAACCTTACTTGTGCTGA
TTTCCTTCGAGCCCCCAGGGTTCAGACGCCTGTCATTGTCCGCTTCTCCA
CTGTTATCCATGAGCGTGGCACCCCTGAAACCCTGAGAGATCCTCGAGGA
TTTGCGGGCCAGTTTTACACCAGAGAAGGTAATTTTGATCCTGGTGGGAA
CAATTTCCCCGTGTTTTTTTGGCCGTGATGGAATGAAATTCCCTGTAATG
GTCCATGCGCTTAAACCTAAACCAATGTTCCACTTCCAGAATAAATGTGG
GATAGGAGAATTTTTGTTCGCACGTCCGGAGAAGTGGCACTTTTCCCCCT
CCTGGTTGGAGGAGGCGGGGGCCCCCATAAATACAGGCACG
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