EY720091

Overview
NameEY720091
Unique NameEY720091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.098e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   48 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 200          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.098e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 205          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.098e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 202          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 203          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 199          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T      AI+ +NGM
Sbjct:   51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGM 203          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.446e-38
Identity = 79/153 (51.63%), Postives = 108/153 (70.59%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RALE LN+T + G+P R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + + KG       T    Q AI+ +NGM
Sbjct:   54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGM 206          

HSP 2 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKSGAG------------NIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYR 795
            T++YV +++ + T+ +  DLF + G++ S  + RD  + +S G+G+VNF++   AA A+E LN     G+ +   R    H R+  LRK                N++I NL   ID + L +  S++GT  SA   R
Sbjct:  236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMR 373          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.194e-38
Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSV-KGLWXCXILT*GVCQKAIEKLNGM 882
            + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN+++     RAL+ LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD  ID+KALHDT +AFG  LS    +  + V KG       T      AI+ +NGM
Sbjct:   41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGM 193          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.172e-38
Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query:  433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882
            SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y+NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FI NLD+ ID+KAL+DT SAFG  LS          +G       T     +AI+ +NGM
Sbjct:   12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEAANRAIQTMNGM 161          

HSP 2 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 45/166 (27.11%), Postives = 77/166 (46.39%), Query Frame = 1
Query:  430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879
            T++Y+ +   ++ D +L ++F+  G  +SV+V  D  T RS G+G+VN+ N +EA +A+  +N   +NG+ I                R     +   + +    N+++ NLD GID   L    S +GT  SA         KG       +     KA+ ++NG
Sbjct:  191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355          
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.172e-38
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 1
Query:  433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882
            SLY+GDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y+NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FI NLD  ID+KAL+DT SAFG  LS       +  +G       T     +AI+ +NGM
Sbjct:   12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEAANRAIQTMNGM 161          
The following BLAST results are available for this feature:
BLAST of EY720091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
PABP_ASPOR1.098e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPNC1.098e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPCL1.098e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_NEOFI1.434e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPTN1.434e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPFU1.434e-3852.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_COCIM2.446e-3851.63Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_EMENI3.194e-3851.63Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPAB_XENTR4.172e-3850.67Embryonic polyadenylate-binding protein OS=Xenopus... [more]
EPABB_XENLA4.172e-3850.00Embryonic polyadenylate-binding protein B OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-H07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720091 ID=EY720091; Name=EY720091; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTACATTTCCAAAAAAGTGAAAAAAAAAAAAACCGACCAC
CAACTAGTTTACCTATCTCTCACGCGCCGCCATCGTCGCCGGCGCCAACA
ATTCGATTATCCTTCTTTCCGCTTCCCTCTCCTCCCCTTTCTCTATCTAT
CTGAGAGGCAAAAACCAAAAAAAAAAAAAAAAGCTTTGAGTTGTTTTTTA
ATTCCGTCTTTTGTTTATTATTACTATCAATTTTAGGGTTTCTTTGGGTC
CCGAAGAATAACAAGAGGAGAGGGAAGAAAAATCCCCATAAAAAGGAAAA
AAAGAAAAAAGGAAAAAATTTCGAGGGAAAAAAAAGGGATTTTTTCTTTC
TGTATTTGAGATGGCTCAGGTTCAAGCTCAGGGGCAGAACGTGAACGGAG
GTGGGGCCAATGCGAATCAATTCGGGACGACGTCGCTTTACGTCGGGGAT
CTGGAGGCGAACGTGACGGATTCGCAGCTGTACGATCTGTTTAATCAAAT
GGGTCAAGTGGTTTCGGTTCGGGTTTGTAGGGACTTGTCGACCCGACGAT
CTCTCGGTTACGGCTACGTTAACTTCAGTAACGCACAGGAAGCTGCAAGG
GCATTGGAGATGCTGAACTTCACACCTCTGAATGGAAAGCCCATTAGGGT
TATGTATTCTCATCGTGACCCAAGTCTTCGCAAAAGTGGCGCAGGGAATA
TTTTCATTANGAACCTAGATAAGGGCATTGATCACAAAGCTTTGCACGAT
ACCNTTTCTGCTTTTGGGACATTTCTCTCTGCAGGNTGCTACAGACCCTC
ATGGTCAGTCAAAGGGCTATGGNATTGTANCATTTTGACATGAGGAGTCT
GCCAAAAAGCTATTGAGAAGTTGAACGGTATGTATTGATGACAG
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