EY720091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 1.585e-37 Identity = 77/153 (50.33%), Postives = 108/153 (70.59%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPS-WSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD TRRSLGY YVN++++++ +ALE LN+T + GKP R+M+S RDP+LRK+G GN+FI NLD ID+KALHDT +AFG LS + + KG T AI+ +NGM Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGM 199
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.071e-37 Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 421 FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + T SLYVGDL +VT++ LY+ F+ G ++S+R+CRDL T S Y YVNF + ++A AL+ +NF + GKP+R+M+S RDPSLRKSG GNIF+ NLDK I++KAL+DT SAFG LS KG T ++AI+K+NGM Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGM 161 HSP 2 Score: 70.4774 bits (171), Expect = 1.494e-11 Identity = 46/165 (27.88%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 ++Y+ + ++ D +L DLF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I R + + + N+++ NLD GID + L S FGT SA KG + KA+ ++NG Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.704e-37 Identity = 77/150 (51.33%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF L G+PIR+M+S RDP LRKSG GNIFI NL+ ID+KAL+DT S FG LS +G T Q+AI +NGM Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGM 161
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.704e-37 Identity = 78/153 (50.98%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPS-WSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN++ + +ALE LN+T + G+P R+M+S RDP+LRK+GAGNIFI NLD ID+KALHDT +AFG LS + + KG T +AI+ +NGM Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGM 211
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.704e-37 Identity = 74/150 (49.33%), Postives = 101/150 (67.33%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLY+GDL +VT++ LY+ F+ G ++S+RVCRD++TRRSL Y Y+NF +A RAL+ +NF + G+PIR+M+S RDP LRKSG GN+FI NLD+ ID+KAL+DT SAFG LS +G T +AI+ +NGM Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTMNGM 161
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.613e-37 Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 TSLYVG+L+ +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNF NA + RA+E LN++ + +P R+M+S RDP+LR++G GNIFI NLD GID+KALHDT +AFG LS G T + AI+ +NGM Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETGSLGYGFVHYETAEAAEAAIKHVNGM 197
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.613e-37 Identity = 79/153 (51.63%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L+ +VT++ L++LFN +G V S+RVCRD TRRSLGY YVNF N ++ +AL+ LN+T + G+P R+M+S RDPSLRK G GN+FI NLD ID+KALHDT SAFG LS + KG + AIE +NGM Sbjct: 79 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGM 231
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.024e-37 Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSW-SVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVG+L+ +VT++ L+++FN +G V SVRVCRD TRRSLGY YVNF N + RALE LN++P+ +P R+M+S RDP+LRK+GAGNI+I NLD ID+KALHDT SAFG LS + + +G + + AI+ +NGM Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGM 197
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.342e-36 Identity = 76/153 (49.67%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYR-PSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN++ + +ALE LN+T + G+P R+M+S RDP+LRK+G GN+FI NLD ID+KALHDT +AFG LS + + + KG T +AI+ +NGM Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGM 212 HSP 2 Score: 73.559 bits (179), Expect = 1.765e-12 Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKSGAG------------NIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKG 816 T++YV ++ VTD + LF + G V S + RD T +S G+G+VNF++ ++A++A++ LN +G+ + R H R+ LRKS N++I NLD +D + L S FG SA R S + G Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPG 386
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.100e-36 Identity = 75/153 (49.02%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYR-PSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN+++ + +ALE LN+T + G+P R+M+S RDP+LRK+G GN+FI NLD ID+KALHDT +AFG LS + + + KG T +AI+ +N M Sbjct: 64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNM 216 The following BLAST results are available for this feature:
BLAST of EY720091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720091 ID=EY720091; Name=EY720091; organism=Citrus sinensis; type=EST; length=894bpback to top |