EY720091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 6.661e-36 Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 SLYVGDL +V +S L+D F+ G V+S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + KPIR+M+S RDPSLR+SG GN+FI NLD+ ID+KA++DT SAFG LS + KG T +I+K+NGM Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGM 153
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 6.661e-36 Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSV----KGLWXCXILT*GVCQKAIEKLNGM 882 +SLYVGDL+ +V +S L DLFNQ+ V ++RVCRDL T RSLGY YVNF+N ++A+RA+E LN+ P+ +PIR+M S+RDPS R SG GN+FI NLD ID+KAL++T S+FGT LS + + V KG Q AI+KLNGM Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSC---KVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGM 195
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.699e-36 Identity = 83/152 (54.61%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 +SLY GDL+ VT++ L+DLF + VVSVRVCRD RRSLGY Y+NFSN +A RA+E LN+TPL +PIR+M S+RDPS R SG GNIFI NLD ID+KAL +T S+FGT LS + KG Q AI+KLNGM Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGM 199
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.484e-35 Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNGMY 885 SLYVGDL VT++ LY+ F+ G ++S+R+CRD TRRSLGY YVN+ +A RALE LNF + G+P+R+M+S RDPSLRKSG GN+FI NL K ID+KAL++ SAFG LS KG ++AI+ +NGM+ Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMF 153
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 150.214 bits (378), Expect = 1.484e-35 Identity = 76/153 (49.67%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVGDLE +V+++ LYD+F+ +G V S+RVCRD T+ SLGY YVNF++ + +A+E LN+TP+ G+ R+M+S RDPSLRK G+GNIFI NL ID+KAL+DT S FG LS+ + KG G ++AI+ LNGM Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGM 189 HSP 2 Score: 68.9366 bits (167), Expect = 4.348e-11 Identity = 47/166 (28.31%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----------------MYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYR-PSWSVKGLWXCXILT*GVCQKAIEKLN 876 T+LYV ++ + TD Q +LF + G +VS + +D + G+G+VN+ ++A +A+E LN + LNG+ + V ++R + K N+F+ NLD +D + L + + +GT SA R + KG T KAI + N Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLK-GFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.531e-35 Identity = 69/118 (58.47%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLS 780 + SLYVG+L+ +VT++ L+++FN +G V S+RVCRD TRRSLGY YVN+ NA + RALE LN++ + G+ R+M+S RDP+LRK+G GNIFI NLD+ ID+KALHDT +AFG LS Sbjct: 45 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILS 162 HSP 2 Score: 68.1662 bits (165), Expect = 7.416e-11 Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI-------------RVMYSHRDPSLR---KSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSV-KGLWXCXILT*GVCQKAIEKLNG 879 T++Y+ +++ VTD++ DL G +SV + RD S G+G+VN+ N + A +A++ LN +NGK + + SH + L KS N+++ NLD D L AFGT S+ R V +G + KA+ ++NG Sbjct: 227 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNG 392
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAG-CYRPSWSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVGDL+ +V+++ LYD+F+ +G V S+RVCRD T+ SLGY YVNF++ A A+E LNFTP+ GK R+M+S RDPSLRK GAGNIFI NL ID+KAL+DT S FG LS+ + KG +AI+ LNGM Sbjct: 34 SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGM 186
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.273e-34 Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 433 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLS 780 SLYVG+LE V+++ LYD+F+ +G V S+RVCRD T SLGY YVNF + + +A+E LN+T + GKP R+M+S RDPSLRK G+GNI+I NL ID+K+LH+T S FG LS Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILS 154 HSP 2 Score: 28.1054 bits (61), Expect = 1.273e-34 Identity = 12/32 (37.50%), Postives = 20/32 (62.50%), Query Frame = 2 Query: 776 SLQXATDPHGQSKGYGIVXF*HEESAKKLLRS 871 S + ATD +G S+G+G V F +E A+ + + Sbjct: 154 SCKVATDENGVSRGFGFVHFENESDARDAIEA 185
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PAP1B_DICDI (Polyadenylate-binding protein 1-B OS=Dictyostelium discoideum GN=pabpc1B PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.234e-34 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 430 TSLYVGDLEANVTDSQLYDLFNQMGQ--VVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPSWSVKGLWXCXILT*GVCQKAIEKLNG 879 TSLYVGDL A+V + L +LF+++G+ + S+ VCRD +T RSLGY YVNF N +A RAL+ LN+T ++GKP R+M+S+RDP+ RK+ GNIF+ NL+KG+D+ L+DT S+FG LS KG T +KAIEK+NG Sbjct: 184 TSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFEKGISKGYGYVHFETNDSAEKAIEKVNG 335
BLAST of EY720091 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.142e-34 Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 427 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIXNLDKGIDHKALHDTXSAFGTFLSAGCYRPS-WSVKGLWXCXILT*GVCQKAIEKLNGM 882 + SLYVG+L +V ++ L+++F+ +GQV S+RVCRD +++SLGY YVN+ ++ +A+E LN+TP+ G+P R+M+S RDPS R+SG GNIFI NL ID+KALHDT SAFG LS K T Q AIE +NGM Sbjct: 66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGM 218 The following BLAST results are available for this feature:
BLAST of EY720091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720091 ID=EY720091; Name=EY720091; organism=Citrus sinensis; type=EST; length=894bpback to top |