EY720050

Overview
NameEY720050
Unique NameEY720050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.972e-64
Identity = 100/159 (62.89%), Postives = 138/159 (86.79%), Query Frame = 1
Query:   43 TGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINPF 519
            T +LE++W G+GI+DWWRNEQFWVIGG S+H FA+FQG+LK++AG+ TNFTVT+K  DD EF ELY+FKWT++LIPPT++ ++N        SDA+N+GY+SWGPLFG++FFA+WVI+HLYPFLKGL+G+Q+R PTI+++WS+LLAS+ +L+ V+I+PF
Sbjct:  814 TSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 5.972e-64
Identity = 100/159 (62.89%), Postives = 138/159 (86.79%), Query Frame = 1
Query:   43 TGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINPF 519
            T +LE++W G+GI+DWWRNEQFWVIGG S+H FA+FQG+LK++AG+ TNFTVT+K  DD EF ELY+FKWT++LIPPT++ ++N        SDA+N+GY+SWGPLFG++FFA+WVI+HLYPFLKGL+G+Q+R PTI+++WS+LLAS+ +L+ V+I+PF
Sbjct:  814 TSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.603e-63
Identity = 108/161 (67.08%), Postives = 133/161 (82.61%), Query Frame = 1
Query:   40 ATGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSKGAD-DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINPF 519
            A+ ILE++W  V ++DWWRNEQFWVIGG S+H FA+FQGLLKV AG+ TNFTVTSK +D DG+F+ELY+FKWTSLLIPPTT+ ++N       +S AIN+GY SWGPL G+L FA WV+ HLYPFLKGLLG+Q+R PTI++VWS LLASI +L+ VRINPF
Sbjct:  891 ASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPF 1051          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.603e-63
Identity = 107/159 (67.30%), Postives = 133/159 (83.65%), Query Frame = 1
Query:   43 TGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINPF 519
            T +LE++W GV I+D WRNEQFWVIGG S+H FA+FQG LK+LAG+ TNFTVTSK ADD EF ELY+ KWT+LLIPPT+L IIN        SDA+N GY++WGPLFG++FFA WVI+HLYPFLKGL+G+Q+R PTI+++WSILLAS+ +L+ VRINPF
Sbjct:  809 TSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPF 967          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.024e-44
Identity = 80/159 (50.31%), Postives = 112/159 (70.44%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK-GAD--DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AG+  +FT+TSK G D  D EF++LY+ KWTSL+IPP  + ++N        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS LLA  ++L+ V INP
Sbjct:  998 VLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.024e-44
Identity = 80/159 (50.31%), Postives = 112/159 (70.44%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK-GAD--DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AG+  +FT+TSK G D  D EF++LY+ KWTSL+IPP  + ++N        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS LLA  ++L+ V INP
Sbjct:  998 VLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.256e-44
Identity = 81/159 (50.94%), Postives = 113/159 (71.07%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK-GADD--GEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AGV  +FT+TSK G DD   EF++LY+ KWTSL+IPP T+ ++N        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A  ++L+ V INP
Sbjct:  973 LLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.965e-44
Identity = 80/159 (50.31%), Postives = 113/159 (71.07%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK--GAD-DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AG+  +FT+TSK  G D D EF++LY+ KWTSL+IPP T+ ++N        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A  ++L+ V INP
Sbjct:  973 LLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.449e-43
Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK--GAD-DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AG+  +FT+TSK  G D D EF+ELY  KWTSL+IPP T+ +IN        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A  ++L+ + I P
Sbjct:  953 MLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111          
BLAST of EY720050 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 4.449e-43
Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = 1
Query:   49 ILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK--GAD-DGEFSELYLFKWTSLLIPPTTLFIINXXXXXXXISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMCVRINP 516
            +LE++W G+ +++WWRNEQFW+IGG S+H  A+ QGLLKV+AG+  +FT+TSK  G D D EF+ELY  KWTSL+IPP T+ +IN        S  I +    W  L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A  ++L+ + I P
Sbjct:  953 MLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111          
The following BLAST results are available for this feature:
BLAST of EY720050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CESA4_ORYSJ5.972e-6462.89Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI5.972e-6462.89Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESAA_ARATH6.603e-6367.08Probable cellulose synthase A catalytic subunit 10... [more]
CESA8_ARATH6.603e-6367.30Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CSLD2_ORYSJ4.024e-4450.31Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI4.024e-4450.31Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ARATH5.256e-4450.94Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD3_ARATH8.965e-4450.31Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD1_ORYSJ4.449e-4350.31Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI4.449e-4350.31Cellulose synthase-like protein D1 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720050 ID=EY720050; Name=EY720050; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTGCTGCAACCGGTAT
CCTTGAGATGCAATGGGGTGGTGTTGGCATAGATGATTGGTGGAGAAACG
AGCAGTTCTGGGTGATTGGAGGTGCTTCGTCGCACTTTTTTGCTCTCTTC
CAGGGTCTACTAAAGGTTTTGGCTGGTGTCAGTACAAACTTCACAGTTAC
CTCTAAAGGAGCAGATGATGGTGAATTTTCTGAGCTTTACCTCTTCAAGT
GGACATCCTTATTAATCCCTCCCACGACTTTGTTTATCATTAATGTAGTC
GGGGTTGTGGTTGGGATCTCGGATGCCATCAATAATGGGTATGATTCATG
GGGCCCACTCTTTGGAAGGCTATTCTTTGCCCTTTGGGTCATCATCCACC
TCTACCCCTTCCTCAAGGGGTTACTAGGAAAACAGGATCGGATGCCTACC
ATTATCTTGGTGTGGTCGATTCTGCTTGCCTCAATCTTGACCCTCATGTG
CGTCAGAATAAACCCATTTTGTCTCCATAGATGGCCCCGTGTTTAAAATT
TGTGGGTTGAACTGTGACTAGGATACGTGGAATAAAAATGGCGTTAGGTG
GCTTTTGGTTCCACTTATGGTCTTATTTGGGAATTGCAAAAAAATTGCTC
TTCCAGCTCAAAATTGTTCATGAGGGCTTCCCGTTCCAATTGTCATGAAA
AAAAAAAATTTTGTGAAACAAAGTTGTACCTTGGGATGGTGTAAAATCAA
AGTGTTGGGGGTTTTGACCTTCGTCATTGTTTTTAAAGGGTTTCATTAAT
TCTTCTATATATTCCGATGGAGTTAGGGTTCCTTTTGGATTTAGGTCCCT
GATTGTTGCAAAAGTTTGAAATATTTTTTTTCCCTGCCTAATAAAACAAA
AAGGGCGCAGACTT
back to top