EY720020

Overview
NameEY720020
Unique NameEY720020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720020 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.220e-54
Identity = 111/183 (60.66%), Postives = 145/183 (79.23%), Query Frame = 1
Query:   97 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFQLSIPSKWNPSKETKFPGQVLRYERHFESHSNVSVIITPN*QQTITDYGSPREFLSKVEQLCWENNPNSGKTSSEGGF 636
            MA + CFLH  AL+++ AR+S   SSQR+VS  K   +VC+AQ+    E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF  Y+GDGFQ+ +P+KWNPS+E ++PGQVLRYE +F++ SN++V++TP  +++ITDYGSP EFLS+V  L  +     G+T+SEGGF
Sbjct:    1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGK-QAYFGETASEGGF 177          
BLAST of EY720020 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.437e-49
Identity = 105/192 (54.69%), Postives = 133/192 (69.27%), Query Frame = 1
Query:   97 MASTQCFLHHHA-------LSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFQLSIPSKWNPSKETKFPGQVLRYERHFESHSNVSVIITPN*QQTITDYGSPREFLSKVEQLCWENNPNSGKTSSEGGFKP 642
            MAST CFLHHHA       LS T + T+     Q H + ++  +  C  +  A+       +SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF    GDGF++ IPSKWNPSKE +FPGQVLRYE +F++ SNV V++ P  +++I DYGSP +FLS+V+ L  +     GKT SEGGF+P
Sbjct:    1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL-------LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGK-QAYFGKTISEGGFEP 184          
BLAST of EY720020 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.483e-48
Identity = 105/183 (57.38%), Postives = 132/183 (72.13%), Query Frame = 1
Query:   97 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFQLSIPSKWNPSKETKFPGQVLRYERHFESHSNVSVIITPN*QQTITDYGSPREFLSKVEQLCWENNPNSGKTSSEGGFK 639
            MAST CFLH      + AR ++S R    +  TQ+ VC+AQK      D + V SRR AL++L GAAA+  KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GF+L IP+KWNPSKE +FPGQVLRYE +F++ SN+SVII P  ++TITDYGSP EFLS+V  L  + +   GKT SEGGF+
Sbjct:    1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQS-YGGKTDSEGGFE 177          
BLAST of EY720020 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.085e-46
Identity = 90/135 (66.67%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  232 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFQLSIPSKWNPSKETKFPGQVLRYERHFESHSNVSVIITPN*QQTITDYGSPREFLSKVEQLCWENNPNSGKTSSEGGF 636
            EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF   NGDGFQ+ +P+KWNPS+E ++PGQVLRYE +F++ SN++V++TP  +++ITDYGSP EFLS+V  L  +     G+T+ EGGF
Sbjct:    1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGK-QAYFGETACEGGF 134          
BLAST of EY720020 vs. ExPASy Swiss-Prot
Match: PSBP_CHLRE (Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBP PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.096e-30
Identity = 81/182 (44.51%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   97 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFQLSIPSKWNPSKETKFPGQVLRYERHFESHSNVSVIITPN*QQTITDYGSPREFLSKVEQLCWENNPNSGKTSSEGGFKP 642
            MA+  C   + A +  P    +S+R       + +V RA         GS VSRR AL    GAAA+ S  SPA+AAYG+SANVFGK    + F+PY GDGF L +P+KWNPSKE  FPG +LRYE +F++ +N+ VI     ++ I D+GS  +FL  V  L  +    SG+T SEGGF P
Sbjct:    1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAGFAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGK-QAYSGETQSEGGFAP 162          
The following BLAST results are available for this feature:
BLAST of EY720020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PSBP_SINAL1.220e-5460.66Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_NARPS3.437e-4954.69Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_WHEAT6.483e-4857.38Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_BRAJU2.085e-4666.67Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_CHLRE6.096e-3044.51Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-A02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720020 ID=EY720020; Name=EY720020; organism=Citrus sinensis; type=EST; length=965bp
TTATTACTTTTTTCTAAAAAAATAAAAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCACGCGTCCGGAGAGAGCGAAAAGAAAAATGG
CATCAACTCAATGCTTCTTGCACCACCATGCACTCTCTACTACACCAGCA
AGAACATCATCATCTCAGCGCCACGTGTCGAACATCAAGCCCACCCAGAT
TGTCTGCCGTGCGCAGAAGCAAGCTGTCCAAGAAGATGACGGCAGCGCCG
TCTCCCGCCGTTTGGCTCTGACGGTGCTCATTGGTGCTGCTGCCGTCGGC
TCCAAGGTCTCTCCTGCCGACGCTGCCTACGGTGAATCAGCCAATGTGTT
TGGTAAGCCAAAGACCAACACTGACTTCTTGCCATACAATGGAGATGGAT
TCCAGCTGTCCATTCCCTCAAAATGGAACCCCAGCAAAGAGACAAAGTTC
CCGGGTCAGGTTCTTAGATACGAAAGACACTTCGAATCCCACAGCAATGT
CTCCGTCATAATCACCCCCAACTGACAACAAACCATCACTGACTACGGGT
CCCCACGAGAATTCCTCAGTAAGGTGGAACAACTTTGCTGGGAAAACAAC
CCTAATTCCGGCAAAACTTCGTCTGAAGGTGGTTTCAAACCCTGATGTTG
TGGAAACGCTTAATCACTGTGGAAGCCTTCAGTCCGACCACCATACTAAC
TTCCTGCCGGTATTAACAAAAACTAGCTAAAGAAAAAAGAAAGGGGGCAA
GCCATAACTAAAGTCACAGCCCCGTGTAAAGGGGGGAAAGTTTAAAATTT
AGAAAGGCCAAGTTTGGGATACAAAAAGTGTGTTATAAGGGAACAAAAAA
ATATTTGGATAACAACATGCCACTCCTCTCAGGGCGTCCCCGGAAGCTTA
ACCAAATTTTTCATTTAAAACCCACTTTATGACACGCGGTTTGTGTTTAA
TTATCCACACCCAAT
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