EY719780

Overview
NameEY719780
Unique NameEY719780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 45/129 (34.88%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  132 DTTILGLDDERAKEMPYIASMGIYVISKDVMLN-LLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEG 512
            D  I   +++       +ASMGIY+ S  V+ + L++ K     DFG  VIP   +   R+ AY Y+GYW+D+GT+ +++ AN+ +    IP F+ Y+    IYT+   +PP  +  DA +  S+IG+G
Sbjct:  172 DNKITEFEEKPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGYWKDVGTLSSYWEANMELI-DIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDG 299          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_BURP8 (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  183 IASMGIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYL----------YDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM------LDADVTDSVIGEGCVIKELQNSPFCCWASILHIRRCN 584
            +ASMGIYV + D + +LL D        +DFG ++IP   + G  +               + YW D+GTI+A++ ANL +    IP    YDR+ PI+T    LPP+K       L    T+ ++  GCVI   Q S     ++++    CN
Sbjct:  204 LASMGIYVFNADYLYSLLEDNITSVATDHDFGKDIIPRVVTSGNAIAHPFSMSCVSSDPSVEPYWRDVGTIDAYWAANLDLAST-IPSLDLYDRNWPIWTHQEQLPPAKFVRDLNGLQGTGTNMIVCGGCVISGSQISRSVLSSNVVVNSFCN 355          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.857e-13
Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 3
Query:   78 IIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVI 521
            I+EF EKP  E  K+ K                   ASMGIY+ +   +  +L D   G    +DFG  VIP     G RV  Y ++GYW+D+GTIE+ + AN+    +  P     +RS  IY++    PP+ + + A+VTDS++ +GC +
Sbjct:  174 IVEFEEKP--EHPKSTK-------------------ASMGIYIFNWPRLRKMLVDSENGNIDMSDFGKNVIPAYLESGERVYTYNFNGYWKDVGTIESLWEANMEYIAENNP-LDSRNRSWKIYSKNHIAPPNFISEHAEVTDSLVVDGCFV 303          

HSP 2 Score: 20.4014 bits (41), Expect = 1.857e-13
Identity = 7/24 (29.17%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  535 IHHSVVGLRSCISEGAIIEDTLLM 606
            + HS++     + +GA I+D+ +M
Sbjct:  307 VDHSILSANVHMKQGAEIKDSFIM 330          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_BACSU (Glucose-1-phosphate adenylyltransferase OS=Bacillus subtilis GN=glgC PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 43/134 (32.09%), Postives = 74/134 (55.22%), Query Frame = 3
Query:  132 DTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DKFP-GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDADVTDSVIGEGCVI 521
            D TI   D++       +ASMGIY+ +  ++   L   D+ P  ++DFG ++IP       ++ AY + GYW+D+GT+++ + AN+ + K+   +   ++R   IY+  P   P     DA V DS++ EGCV+
Sbjct:  171 DGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGYWKDVGTVQSLWEANMDLLKED-SELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEGCVV 303          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_LACCB (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain BL23) GN=glgC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.132e-13
Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 3
Query:   93 EKPKGEQLKAMKVDTT--ILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVI 521
            EK + ++   M  D T  I+  +++ AK    +ASMGIY+ +   +   L + +       DFG +VIP   +      AY + GYW+D+GTI++ + AN+     P    +  +R+  I++Q   LPP  +   A V  S+I +GC +
Sbjct:  156 EKEEAKRFGIMNTDDTDRIIEFEEKPAKPKSNLASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANMEFL-NPNNPLNIGNRNWRIFSQNEALPPMFLTKTAKVAGSMIVDGCYV 303          

HSP 2 Score: 25.0238 bits (53), Expect = 3.132e-13
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  535 IHHSVVGLRSCISEGAIIEDTLLM 606
            I HS++     I EG++I+D+++M
Sbjct:  307 IQHSILSQNVKIGEGSVIKDSMIM 330          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_LACC3 (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=glgC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.132e-13
Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 3
Query:   93 EKPKGEQLKAMKVDTT--ILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVI 521
            EK + ++   M  D T  I+  +++ AK    +ASMGIY+ +   +   L + +       DFG +VIP   +      AY + GYW+D+GTI++ + AN+     P    +  +R+  I++Q   LPP  +   A V  S+I +GC +
Sbjct:  156 EKEEAKRFGIMNTDDTDRIIEFEEKPAKPKSNLASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANMEFL-NPNNPLNIGNRNWRIFSQNEALPPMFLTKTAKVAGSMIVDGCYV 303          

HSP 2 Score: 25.0238 bits (53), Expect = 3.132e-13
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  535 IHHSVVGLRSCISEGAIIEDTLLM 606
            I HS++     I EG++I+D+++M
Sbjct:  307 IQHSILSQNVKIGEGSVIKDSMIM 330          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_GEOTN (Glucose-1-phosphate adenylyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 48/159 (30.19%), Postives = 86/159 (54.09%), Query Frame = 3
Query:   72 LSIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DKFP-GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-----QPRYLPPSKMLDADVTDSVIGEGCVIK 524
            + I+EF+EKP                     A+    +ASMGIY+ +  ++   L+  +  P  ++DFG +VIP       R+ AY ++GYW+D+GT+++ + AN+ +  +   +   +DRS  IY+      P+Y+ P    +A+V+DS++ EGCV++
Sbjct:  172 MEIVEFAEKP---------------------AEPKSNLASMGIYIFNWPLLKQYLQIDNANPHSSHDFGKDVIPMLLREKKRLFAYPFEGYWKDVGTVKSLWEANMDLLDEN-NELDLFDRSWRIYSVNPNQPPQYISP----EAEVSDSLVNEGCVVE 304          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_CLOBA (Glucose-1-phosphate adenylyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 3
Query:   72 LSIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD---KFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIK-ELQNS 539
            +SI EF EKPK  +                       +ASMGIY+ +   +   LR+       +NDFG ++IP   + G ++ AY ++GYW+D+GTIE+ + AN+ + K      + +D+   IY+     P   +  +A VT+S+I EGC +   +QNS
Sbjct:  173 MSIYEFEEKPKIPKSN---------------------LASMGIYIFNWKTLKKYLRNDEANKSSSNDFGKDIIPSMLNDGGKMVAYPFEGYWKDVGTIESLWQANMDLLKSD-NKLNLHDQDWRIYSTNPVRPAQYIGENAKVTNSLIVEGCTVNGTVQNS 311          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_BACLD (Glucose-1-phosphate adenylyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  183 IASMGIYVISKDVMLNLL-RDKFPGAN--DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVI 521
            +ASMG+YV    V+ + L RD+   A+  DFG +VIP       R+ AY + GYW+D+GT+ + + AN+ +     P    ++R+  IY+    LPP  + D A++ +S++ EGC +
Sbjct:  188 LASMGVYVFKWSVLEDALERDEKNSASSHDFGKDVIPALLEENKRLNAYPFKGYWKDVGTVRSLWEANMDLLGDH-PPLDLFERNWRIYSVSPNLPPQFVADLAEIKESLVSEGCTV 303          
BLAST of EY719780 vs. ExPASy Swiss-Prot
Match: GLGC_THEYD (Glucose-1-phosphate adenylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.100e-13
Identity = 45/134 (33.58%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  171 EMPYIASMGIYVISKDVMLN-LLRDKFPGANDFGSEVIPGATSIGMRVQAYLYD---------------GYWEDIGTIEAFYNANLGIT-KKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVI 521
            +M Y+ SMG Y+ + D++++ L+R +    +DFG+ VIP    +G + + Y YD               GYW D+GTI A+++A++ +  +KPI  F  Y++  PI+      PP K+LD ++ +S+I EG +I
Sbjct:  190 DMAYV-SMGNYIFNADILIDALVRAEKKKQHDFGAHVIPDL--VGRKCKVYAYDFAKNEIPGIKSYEERGYWRDVGTISAYFDAHMDMLGEKPI--FEIYNKMWPIHPARYEGPPVKILDGEIKNSIIAEGALI 318          
The following BLAST results are available for this feature:
BLAST of EY719780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
GLGC_EUBE21.605e-1334.88Glucose-1-phosphate adenylyltransferase OS=Eubacte... [more]
GLGC_BURP81.605e-1332.03Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC_STRU01.857e-1334.21Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_BACSU2.096e-1332.09Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_LACCB3.132e-1330.20Glucose-1-phosphate adenylyltransferase OS=Lactoba... [more]
GLGC_LACC33.132e-1330.20Glucose-1-phosphate adenylyltransferase OS=Lactoba... [more]
GLGC_GEOTN4.671e-1330.19Glucose-1-phosphate adenylyltransferase OS=Geobaci... [more]
GLGC_CLOBA4.671e-1331.68Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_BACLD4.671e-1335.04Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_THEYD6.100e-1333.58Glucose-1-phosphate adenylyltransferase OS=Thermod... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-G04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719780 ID=EY719780; Name=EY719780; organism=Citrus sinensis; type=EST; length=901bp
AATTTTGATTGGGAGAGAAGCTGGTGCGTTTTGAGTGAGTGTGTAATCCG
GTGACTGTAATCTGGTGCTTTTTGAGCATAATTGAATTTTCTGAGAAACC
AAAAGGAGAGCAACTTAAAGCTATGAAGGTTGATACCACCATATTAGGTC
TTGATGATGAGAGAGCTAAAGAGATGCCTTACATAGCAAGTATGGGTATT
TATGTCATCAGCAAAGATGTGATGTTAAATCTGCTAAGGGATAAATTTCC
TGGAGCTAATGATTTTGGAAGTGAAGTTATCCCTGGTGCAACTTCCATTG
GGATGAGAGTGCAAGCATATTTATATGATGGCTACTGGGAAGACATTGGA
ACAATTGAGGCTTTCTACAATGCGAATCTGGGGATCACCAAAAAGCCAAT
TCCGGATTTCAGCTTCTATGACCGTTCTGCTCCAATCTATACACAGCCTA
GATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTA
ATTGGTGAAGGCTGTGTGATTAAAGAATTGCAAAATTCACCATTCTGTTG
TTGGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTA
CTTATGGGAGCAGATAATTATGAGACGGATGCGGACAGGAAGGTTTTGGC
TGCAAAGGGTAGTGTTCCAATTTGGAATTGGCAAGAAATTCTCACATCAA
GAAAAGCAATAATCGAAAAAAAAGGCTCCAATTTGGGGAAAAAGGGGAAA
AATCGTCAAACATGGACAGGGGGGAAAAAAACCCCAAGGGGAAACAAAAG
GGGAAACTTTCCTTCAAAAAGGGGGGTTTGGTCCAAATAAATCAAGGGAG
GCCCTTGGGTTCCCCCGGGGGAAACCCTAAATTCTAAAACGGGGCGCTCC
T
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