EY719776

Overview
NameEY719776
Unique NameEY719776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length337
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: SAPD_SALTY (Peptide transport system ATP-binding protein sapD OS=Salmonella typhimurium GN=sapD PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V  VS  ++ GE+ G+VGESGSGK+  A+AI G+      V    +RF+ +++ + S    RKL G  + M+FQEP + L+PS  +GRQL + +
Sbjct:   23 VDRVSMTLSEGEIRGLVGESGSGKSLIAKAICGVAKDNWRVTADRMRFDDIDLLRLSSRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: SAPD_SHIFL (Peptide transport system ATP-binding protein sapD OS=Shigella flexneri GN=sapD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V  VS  +  GE+ G+VGESGSGK+  A+AI G+      V    +RF+ +++ + S    RKL G  + M+FQEP + L+PS  +GRQL + +
Sbjct:   23 VDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: SAPD_ECOLI (Peptide transport system ATP-binding protein sapD OS=Escherichia coli (strain K12) GN=sapD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V  VS  +  GE+ G+VGESGSGK+  A+AI G+      V    +RF+ +++ + S    RKL G  + M+FQEP + L+PS  +GRQL + +
Sbjct:   23 VDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: SAPD_ECOL6 (Peptide transport system ATP-binding protein sapD OS=Escherichia coli O6 GN=sapD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V  VS  +  GE+ G+VGESGSGK+  A+AI G+      V    +RF+ +++ + S    RKL G  + M+FQEP + L+PS  +GRQL + +
Sbjct:   23 VDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: SAPD_ECO57 (Peptide transport system ATP-binding protein sapD OS=Escherichia coli O157:H7 GN=sapD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V  VS  +  GE+ G+VGESGSGK+  A+AI G+      V    +RF+ +++ + S    RKL G  + M+FQEP + L+PS  +GRQL + +
Sbjct:   23 VDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: APPF_BACSU (Oligopeptide transport ATP-binding protein appF OS=Bacillus subtilis GN=appF PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = -3
Query:   42 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLH 332
            V GVSF +  GE +GIVGESG GK+ A R ++ L  P      G I F+G +++  S   LRK     I MVFQ+P  SLNP  ++   + E    H
Sbjct:   36 VDGVSFSLKKGETLGIVGESGCGKSTAGRTMIRLYKP----TEGQILFKGQDISNLSEEKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTH 128          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPF_HAEIN (Oligopeptide transport ATP-binding protein oppF OS=Haemophilus influenzae GN=oppF PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = -3
Query:   39 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHR 332
            V  VSF++  GE +G+VGESG GK+  ARAI+GL    +  + G I + G  + + S    ++ R   I M+FQ+P+ SLNP M+IG  + E LK+++
Sbjct:   39 VKDVSFKLYAGETLGVVGESGCGKSTLARAIIGL----VEASEGEILWLGKHLRKQSAKQWKETR-KDIQMIFQDPLASLNPRMNIGEIIAEPLKIYQ 131          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPF_ECOLI (Oligopeptide transport ATP-binding protein oppF OS=Escherichia coli (strain K12) GN=oppF PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = -3
Query:   21 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL-----KLHRRDRRPR 332
            V GV+  +  GE +G+VGESG GK+  ARAI+GL    +    G + + G E+    P   R +R + I M+FQ+P+ SLNP M+IG  + E L     K+ R++ R R
Sbjct:   40 VDGVTLRLYEGETLGVVGESGCGKSTFARAIIGL----VKATDGHVAWLGKELLGMKPDEWRAVR-SDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRER 143          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPD_MYCGE (Oligopeptide transport ATP-binding protein oppD OS=Mycoplasma genitalium GN=oppD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11
Identity = 35/101 (34.65%), Postives = 60/101 (59.41%), Query Frame = -3
Query:   30 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHRRDR 332
            V G+  +V  G +VGIVGESGSGK+ + ++I+G        A   + F+ V++T+      +  RG  +  + Q+P+ SLNP+M+IG+Q+ E + +  + R
Sbjct:   41 VRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFNDNAQTKAK-LMNFKNVDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIYVASKRR 140          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPD_MYCPN (Oligopeptide transport ATP-binding protein oppD OS=Mycoplasma pneumoniae GN=oppD PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.389e-11
Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = -3
Query:   51 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGL 332
            V GV  +V  G +VGIVGESGSGK+   ++I+G        A   + F+ +++++      +  RG  +  + Q+P+ SLNP+M+IGRQ+ E +
Sbjct:   41 VRGVDLKVKKGSIVGIVGESGSGKSVCVKSIIGFNDGAKTTAK-LMNFKNIDISKMKKHQWQYYRGTYVSYISQDPLFSLNPTMTIGRQVKEAI 133          
The following BLAST results are available for this feature:
BLAST of EY719776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
SAPD_SALTY2.749e-1340.43Peptide transport system ATP-binding protein sapD ... [more]
SAPD_SHIFL3.590e-1340.43Peptide transport system ATP-binding protein sapD ... [more]
SAPD_ECOLI3.590e-1340.43Peptide transport system ATP-binding protein sapD ... [more]
SAPD_ECOL63.590e-1340.43Peptide transport system ATP-binding protein sapD ... [more]
SAPD_ECO573.590e-1340.43Peptide transport system ATP-binding protein sapD ... [more]
APPF_BACSU8.843e-1241.24Oligopeptide transport ATP-binding protein appF OS... [more]
OPPF_HAEIN3.360e-1140.82Oligopeptide transport ATP-binding protein oppF OS... [more]
OPPF_ECOLI3.360e-1139.45Oligopeptide transport ATP-binding protein oppF OS... [more]
OPPD_MYCGE3.360e-1134.65Oligopeptide transport ATP-binding protein oppD OS... [more]
OPPD_MYCPN4.389e-1136.17Oligopeptide transport ATP-binding protein oppD OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-F10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719776 ID=EY719776; Name=EY719776; organism=Citrus sinensis; type=EST; length=337bp
GTCCCGGGGTTCGGGAATTCCCGGGGTCGACGGTCGCGGCGATGCAGCTT
GAGCCCTTCGTCCAGCTGGCGCCCGATGGACATGGACGGGTTGAGCGAGG
TCATGGGTTCCTGGAACACCATGCCGATGCGCGCGCCGCGCAGCTTGCGC
AGCGCGGCCGGGCTGGCCTGGGTGACTTCCACGCCCTCGAAGCGGATCGA
GCCGCCGGCCACCACCAGCGGCGGCGGCGTCAGGCCCATGATGGCGCGCG
CCGCCTGGGTCTTGCCGCTGCCGGACTCGCCGACGATGCCGACCATTTCG
CCCGGCGCCACCTCGAAGGACACGCCGCCGACGATTT
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