EY749277

Overview
NameEY749277
Unique NameEY749277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.197e-28
Identity = 66/137 (48.18%), Postives = 88/137 (64.23%), Query Frame = 2
Query:   11 SEGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 421
            ++GPN A VTACATG +SIG+A +++Q GD+D M+ GGTE+ I  +++AGF  SRAL+T  N   + A RPF  GRDGF                A+ RGA IYAE+ GYG +GDA+HIT P  +G+G   AM  A+
Sbjct:  154 AKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAM 288          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.215e-27
Identity = 67/138 (48.55%), Postives = 87/138 (63.04%), Query Frame = 2
Query:   11 SEGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            ++GPN+  VTACA G+++IGDA R++Q G +  M+ GGTE++I  LS AGF  +RAL+ + N  P  ASRPFD  RDGF                A  RGAKIY E+ GY M+ DA+HIT P  DG+GA  A+  ALK
Sbjct:  156 AKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALK 292          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: CEM1_YEAST (3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces cerevisiae GN=CEM1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.778e-24
Identity = 63/136 (46.32%), Postives = 82/136 (60.29%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            G +H+  TACATG +SIGDA   I+ G  D+ VAG +E+S+  LS+AGF +++++TT  NG     SRPFD  R GF               HA+KR A I +E+ GYG+S DA HIT P  DG GA  A+  ALK
Sbjct:  178 GLSHSVSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHPLSLAGFIRAKSITT--NG----ISRPFDTQRSGFVLGEGCGMIVMESLEHAQKRNANIISELVGYGLSSDACHITSPPADGNGAKRAIEMALK 307          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.622e-22
Identity = 58/136 (42.65%), Postives = 78/136 (57.35%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            GPN++  TACAT  +    AA  I+ G++D+M+AGGTE++I  + + GF   RAL+ + N  PQ ASRP+D  RDGF               HA KRGA I AE  G  ++ DAHH+T P  DG G    + R L+
Sbjct:  215 GPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQR-NDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLE 349          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FAB1_MYCTU (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium tuberculosis GN=kasA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.699e-21
Identity = 58/130 (44.62%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   35 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            V+AC++G+ +I  A R I  GD+DV V GG E  I+AL +A F   RA++T+ N  P+ ASRPFD  RDGF               HAK RGAK  A + G G++ DA H+  P  DG  A  AMTR+L+
Sbjct:  168 VSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLE 296          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FAB1_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis GN=kasA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.699e-21
Identity = 58/130 (44.62%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   35 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            V+AC++G+ +I  A R I  GD+DV V GG E  I+AL +A F   RA++T+ N  P+ ASRPFD  RDGF               HAK RGAK  A + G G++ DA H+  P  DG  A  AMTR+L+
Sbjct:  168 VSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLE 296          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FAB1_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae GN=kasA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 58/130 (44.62%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   35 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            V+AC++G+ +I  A R I  GD+DV V GG E  I+AL +A F   RA++T+ N  P+ ASRPFD  RDGF               HAK RGAK  A + G G++ DA H+  P  DG  A  AMTR+L+
Sbjct:  168 VSACSSGSEAIAHAWRQIIMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDDPEGASRPFDKNRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLE 296          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABB_HAEIN (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus influenzae GN=fabB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.101e-20
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 445
            G N++  +ACAT AH IG A  +IQ G  DV+ AGG E  +       F    A++TKYN TP++ASR +D  RDGF               HA  RGAKIYAE+ GYG + D + +  P   G+GA     R +KQ +  VD
Sbjct:  153 GVNYSMSSACATSAHCIGHAVELIQLGKQDVVFAGGAEE-LSWECATEFDAMGAVSTKYNETPEKASRAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGA----ERCMKQAMATVD 288          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABB_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli (strain K12) GN=fabB PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 445
            G N++  +ACAT AH IG+A   IQ G  D++ AGG E     ++   F    AL+TKYN TP++ASR +D  RDGF               HA  RGA IYAE+ GYG + D   +  P   G+GA+    R +K  +H VD
Sbjct:  154 GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAV----RCMKMAMHGVD 289          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABB_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli O6 GN=fabB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 445
            G N++  +ACAT AH IG+A   IQ G  D++ AGG E     ++   F    AL+TKYN TP++ASR +D  RDGF               HA  RGA IYAE+ GYG + D   +  P   G+GA+    R +K  +H VD
Sbjct:  154 GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAV----RCMKMAMHGVD 289          
The following BLAST results are available for this feature:
BLAST of EY749277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
FABF_STAAC3.197e-2848.183-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_SYNY31.215e-2748.553-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Syn... [more]
CEM1_YEAST4.778e-2446.323-oxoacyl-[acyl-carrier-protein] synthase homolog ... [more]
KASC1_ARATH2.622e-2242.653-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
FAB1_MYCTU1.699e-2144.623-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FAB1_MYCBO1.699e-2144.623-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FAB1_MYCLE2.899e-2144.623-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FABB_HAEIN1.101e-2041.263-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Hae... [more]
FABB_ECOLI1.439e-2040.563-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]
FABB_ECOL61.439e-2040.563-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749277 ID=EY749277; Name=EY749277; organism=Citrus sinensis; type=EST; length=939bp
CACCCACGCGTCCGAGGGACCAAACCATGCTGCTGTAACTGCCTGTGCTA
CCGGCGCACATTCTATCGGTGATGCTGCAAGAATGATTCAGTTTGGTGAT
TCAGATGTCATGGTGGCTGGGGGCACTGAGTCCAGTATCGATGCTTTATC
TATGGCAGGATTTTGCAAGTCGAGAGCTTTGACTACAAAGTACAATGGCA
CCCCACAAGAAGCTTCGCGACCTTTTGATTGTGGCCGGGATGGGTTTGTA
ATAGGTGAAGGTTCTGGTGTCTTGGTATTAGAGGAACTTGAGCATGCTAA
AAAACGAGGAGCCAAAATATATGCTGAGGTTCGTGGCTATGGGATGTCAG
GTGATGCACATCACATAACCCAACCACATATTGATGGAAAAGGTGCCATT
TTGGCCATGACACGTGCCTTAAAACAGGTAGTACACAATGTTGATGGCTT
TGAACAGTTGTCCATCCAATAGTAGTTGTTAGCAGCTGAACTAAATTACC
TATGAAGACTTCAGCATTGGATGTAGTTGTATTAGCACTTTGATCAATTA
TAGCCCAGGGTTTGGGCGGGCAGCATTTATCTTGGGGTTTAGACAACCAT
TCAATGGTTTTTTGACTTCTTAGTGATGCCTCCCCCGGGGCTTCAACAAG
AACTAATAATTAAGAGCTTCAAGAATTATTGGGGGTTCTTACTTTCTATT
TGATTACTGGTGGCTTAACTGGAATTTAATTGGGAGTACCTTTTTAATCA
AAAAAACCCTTGTTGCTTTCTTTTACTGGGGCGTTTAACAAAACGTTTTT
TTTGCTGGCCCCGCCCTTGGCCCCCCATAAACCTCCCTTTGGGGGGGAAA
AAAAATGGGTTTTCCCCTTTTCTTTTTTTTTTATACCCCCTTATGCGGGG
GGGTGCCCCAAAAAAACAAATTTTTCTTTCTTTTTGGTG
back to top