EY749276

Overview
NameEY749276
Unique NameEY749276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_008750 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 1
Query:   94 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLA 537
            S+  T+ +   + P  IF+I D  +RR    ERVIGTLLG+   DGT V+IR+++ V H E +DQV +D+EY   ML  HLK NP+EV+VGW++T   +   SALI  FY  +     P+P VHLTV T     +   +AY+S  + +   + A
Sbjct:   21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTE-PGKDIETRAYISAPVGVTAERAA 173          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  127 VHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDT---GFKNGEGTVKAYVS 504
            VHP+ +F+I D Y+RR D   RVIGTLLG+   +  ++I+N + VPH E ++  QV +D+EYH +M +   KV P EVIVGW++T   +   SALI +FY RE      VHLT+DT   G K     +K+Y+S
Sbjct:   34 VHPVALFSILDHYLRRNDGQHRVIGTLLGT-RTESEIEIKNCFAVPHLEDAEEGQVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGIKSYIS 165          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPNC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.136e-21
Identity = 63/154 (40.91%), Postives = 91/154 (59.09%), Query Frame = 1
Query:   94 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLA 537
            ++  T+ +   + P  +F+I D  +RR    ERVIGTLLG+   DGT V+IR+++ V H E +DQV +D+EY   ML  HLK NP+EV+VGW++T   +   SALI  FY  +     P+P VHLTV T       T +AY+S  + +   + A
Sbjct:   21 TAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIET-RAYISAPVGVTAERAA 173          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EIF3F_COCIM (Eukaryotic translation initiation factor 3 subunit F OS=Coccidioides immitis GN=CIMG_07134 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.557e-20
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1
Query:  106 TSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 462
            T+ +   + P  IF+I D  +RR    ERVIGTLLG+   DGT V+IR  + V H E +DQV +D+EY   ML  HLK NP+EV+VGW++T   +   SALI  FY  +     P+P VHLTV T
Sbjct:   25 TAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTCFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYGGQGDGTWPHPAVHLTVST 149          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila sechellia GN=eIF3-S5-2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.721e-19
Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  112 NITAKVH--PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLAAQFQENPL 561
            +I AKV   PLV+F I D Y RRP    +V+GTLLG    D  ++I N + VPH E S+  ++ LD+ Y   +L+ ++   P E ++GWF TG  V+  ++LIH++Y RE     P+HL VD   KN   + + Y +V + +        F   PL
Sbjct:    6 SIRAKVFLKPLVLFQIIDAYDRRPKGDNQVMGTLLGRTKEDH-IEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPL 160          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EIF3F_NEUCR (Eukaryotic translation initiation factor 3 subunit F OS=Neurospora crassa GN=1A9.200 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.248e-19
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 1
Query:   76 VLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPD---QAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCR----EVPNP-VHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLA 537
            VL FG S+A    +T  + P  +F+I D  VRR D   Q+ RVIG L+G    DG+ V++R+++ +PH E  DQV +D+EY   ML   LK NP+E ++GW++T   +   SALI  F+        P+P VHLT+ T         K Y+S  +++   + A
Sbjct:   19 VLGFGVSNAP---LTVNIQPQAVFSIIDHAVRRDDRDTQSTRVIGALVGVRSEDGSEVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKANPRETLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTIGTE-AGATIDTKTYISAPVAVSPERAA 177          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EI3F2_DROME (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila melanogaster GN=eIF3-S5-2 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.248e-19
Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  112 NITAKVH--PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLAAQFQENPL 561
            ++ AKV+  PLV F I D Y RRP    +V+GTLLG    +G ++I N + VPH E S+  ++ LD+ Y   +L+ ++   P E ++GWF TG  V+  ++LIH++Y RE     P+HL VD   KN   + + Y +V + +        F   PL
Sbjct:    6 SMRAKVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRN-KEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPL 160          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EI3F2_DROWI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila willistoni GN=eIF3-S5-2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.541e-19
Identity = 50/150 (33.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  127 VHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPD-GTVDIRNSYVVPHNEF--SDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLAAQFQENPL 561
            + PLV+ +I D Y RRP    +VIGTLLG   P+ G ++I N + + H ++  SD++ +D++Y + M + +    PQE I+GW++TG  V+  +  +HE+Y RE    NP+HL +DT  +     ++ Y +V + + +      F   P+
Sbjct:   13 LQPLVLLHIIDAYERRPKDCTQVIGTLLGRNNPESGHLEISNCFTLLHKDYPNSDRIDVDLQYANDMYELNQLTYPQEKIIGWYATGKEVSRSAVNLHEYYARECADGNPMHLLIDTSLRGQRMMMRLYTAVVMGVPNGTKGLMFSLLPV 162          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila simulans GN=eIF3-S5-2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.541e-19
Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  133 PLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLAAQFQENPL 561
            PLV+F I D Y RRP    +V+GTLLG    D  ++I N + VPH E S+  ++ LD+ Y   +L+ ++   P E ++GWF TG  V+  ++LIH++Y RE     P+HL VD   KN   + + Y +V + +        F   PL
Sbjct:   15 PLVLFQIIDAYDRRPKGDNQVMGTLLGRNKEDH-IEITNCFTVPHKEHSENKRIDLDMTYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPL 160          
BLAST of EY749276 vs. ExPASy Swiss-Prot
Match: EI3F2_DROAN (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila ananassae GN=eIF3-S5-2 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.116e-18
Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  112 NITAKV--HPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFKNGEGTVKAYVSVNLSLGDRKLAAQFQENPL 561
            N+ AKV   PLV+F I D Y RRP  A ++IGTLLG       + I N + V H E  D  ++ LD+ Y + ML+ +    PQE ++GWFSTG  V+  + L+H++Y RE  +  P+HL VD   K    + + Y  V + +        F   PL
Sbjct:    6 NLQAKVVLQPLVLFQIIDSYERRPKDATQIIGTLLGRS-NGKEITITNCFTVLHKEHPDSARIDLDLGYANDMLELNQLTYPQEKVLGWFSTGKSVSRSALLLHDYYSRECSDGQPLHLLVDATLKGQRLSTRLYCGVEMGVPGGTKGLMFSLVPL 160          
The following BLAST results are available for this feature:
BLAST of EY749276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
EIF3F_ASPFC1.078e-2141.56Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_USTMA2.401e-2145.11Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_ASPNC3.136e-2140.91Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_COCIM1.557e-2047.20Eukaryotic translation initiation factor 3 subunit... [more]
EI3F2_DROSE1.721e-1937.18Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_NEUCR2.248e-1937.42Eukaryotic translation initiation factor 3 subunit... [more]
EI3F2_DROME2.248e-1936.54Eukaryotic translation initiation factor 3 subunit... [more]
EI3F2_DROWI8.541e-1933.33Eukaryotic translation initiation factor 3 subunit... [more]
EI3F2_DROSI8.541e-1936.73Eukaryotic translation initiation factor 3 subunit... [more]
EI3F2_DROAN1.116e-1837.18Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749276 ID=EY749276; Name=EY749276; organism=Citrus sinensis; type=EST; length=985bp
CCACGCGTCCGCTCTTTGCTTTTTGAGTCGAGATCAGAAGAGAAGAAGAT
AAGAATGGCGGCAAGCGACCGCACGGTGCTGCAATTCGGACCTTCATCAG
CGGTGACGTCGAATATAACGGCGAAAGTTCACCCGCTGGTTATTTTCAAC
ATCTCCGACTGTTACGTCAGACGCCCCGACCAAGCTGAACGCGTCATCGG
CACGCTTCTTGGCTCCGTTTTGCCTGATGGCACCGTCGATATCCGTAACT
CCTACGTCGTTCCTCACAACGAGTTCTCCGATCAGGTTGCATTGGATATT
GAATACCATCATACCATGTTAAAGTCACACCTAAAGGTGAATCCTCAGGA
AGTGATTGTTGGATGGTTTTCTACAGGGTTGGGAGTCACTGGTGGCAGTG
CCTTGATCCATGAATTCTATTGTCGCGAAGTTCCTAATCCTGTCCACCTG
ACTGTAGATACAGGATTCAAAAATGGAGAGGGTACTGTAAAAGCTTATGT
TTCTGTCAATTTGTCTCTTGGAGATCGAAAGCTTGCTGCACAATTTCAAG
AAAATCCCCTCCTTTGATCTTTCCAAATGAATTGAACCTGAGCGAGTTGG
ATTCCGATATTCTGAAATCAACTTCGGTTGACAAACTCCCTAAGGGATTG
GAAAGGAATGGAAAGTCCTGAAGGAAACGGCTACTTAACCTCTAATAAAG
GAAATTCCTACCAAATATGGTGATGGAACCTGGGGGAAAGGGGCTGGCGG
TAACCTGAACAAATACTGGGAGGGCGTATTTCTTCTCTAAAAACCTGTAA
CACCCCCCTTCCCCAAACTTGCACCCCCCCCCACCTTTTGTACAAAAATT
TGTTAAATAAAAAACCGCCCAGAGGGAGCCAAATTATGTTCCTTTTCGCT
TTTTTTTTTGCGTTGAACTATACTCTCCACCGAGCCACCCCCCTACGCCT
CAACTTTTTGTTTACACTGAATATAATATTTATGA
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