EY749273

Overview
NameEY749273
Unique NameEY749273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC241_SACCA (Protein transport protein SEC24-1 OS=Saccharomyces castellii GN=SEC241 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 3 
Query:   15 QVYYYYPFSA--LSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRK 512
            Q ++Y  FSA  ++D  K   +   +++     E VMR R S GI+   +HG+F  R         ++ +++ +  +  D+ +     C  Q A+L +    QRRIRV TL+LP T +++ +Y S D       F ++A  +   T L   R  +     + L +Y+K
Sbjct:  513 QTHFYPGFSAQRITDATKFSMEFAKHLSMDTSNEVVMRARGSTGIRTTGFHGHFFNRSSDLCAFSIMNRDQSYVFDITLDENIA-AEYCYVQVAILLSLNTSQRRIRVITLALPTTDSIAEVYASVDQLAVTAAFTQKAIDKAQDTSLEEARRFINQSVEDVLTTYKK 679
The following BLAST results are available for this feature:
BLAST of EY749273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
SC241_SACCA6.306e-1127.38Protein transport protein SEC24-1 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749273 ID=EY749273; Name=EY749273; organism=Citrus sinensis; type=EST; length=964bp
CACCCACGCGTCCGCAGGTTTATTATTACTACCCATTTTCAGCGCTTTCT
GATCCTGCAAAATTGTACAATGACCTTAGATGGAACATCACAAGGCCCCA
AGGATTTGAGGCAGTAATGCGCGTCAGATGCAGCCAGGGTATCCAAGTCC
AAGAATACCATGGGAACTTCTGCAAACGGATTCCAACAGACATTGACCTA
CCTGCGATTGACTGTAACAAAGCTATAATGGTAACCTTAAAGCATGATGA
TAAATTGCAGGATGGCTCAGAATGTGCTTTTCAGTGCGCCCTTCTTTATA
CCACTGTTTATGGCCAAAGACGAATTCGAGTTACAACTTTATCTTTGCCA
TGCACCAGTAATTTAAGTAATCTGTACCGTTCAGCTGACTTGGATACTCA
ATTTACATGTTTTATGAAGCAAGCGGCAAGTGAAATTCCTTCAACCCCAC
TAGCAAATGTCCGGGAACAAATGATGAACCTTTGCGTAAATGCTCTGGTT
TCATATCGTAAATTTTGTGCGACAGTATCATCATCTGGGCAGCTTATTCT
TCCAGAGGCTCTGAAGCTTTTTGCCCTTTGTACCCCCTTGCATTAATTAA
AAAGTACAGGATTGCGAAACTGATGGCAAAATAAATGATCCAATCTTTTT
GGAAAACTTTATGTTTCTTTCTGTTTCTATTCCCTTTTTGCGGTCCCTTT
TGGGAACCCCAAGGATGGGGGCTATCCCTGAACTTTGACAAGGGAAAAAA
AAGGGTCCTTTTATTTCCCCCTTTCTTTCCTCTTTCTAATGGAAACCCGG
GAGGGAAGAAAGGGAAACTTATCTTCTCTAAAAAAAGGGGGAGGAATAGT
TTTAAAAAATTATTTTGGGGAGCCCACTGGGGGGAATTCACAGAAAATCC
TTGCCACCTCCACAACGTGCTCGCGCGCAAAATTCCCCCCCGCGGTTATA
AAAAAAAAAAATCC
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