EY749271

Overview
NameEY749271
Unique NameEY749271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length396
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig226 contig Csv1_Contig226:412..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.630e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.486e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKEST
Sbjct:    7 TLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
[Close]
BLAST of EY749271 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 3 
Query:    3 TRPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 182
            T  GKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    7 TLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
The following BLAST results are available for this feature:
BLAST of EY749271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
UBIQ_CANFA2.014e-2491.67Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1[more]
UBIQ_CAMDR2.014e-2491.67Ubiquitin OS=Camelus dromedarius PE=3 SV=2[more]
UBIQ_BOVIN2.014e-2491.67Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1[more]
UBIQ_TETPY2.630e-2490.00Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]
UBIQ_EIMBO4.486e-2490.00Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_TRYBB5.859e-2490.00Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1[more]
UBIQ_STRPU5.859e-2490.00Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_ENCCU5.859e-2490.00Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_DICDI5.859e-2490.00Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_PHYIN1.705e-2388.33Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749271 ID=EY749271; Name=EY749271; organism=Citrus sinensis; type=EST; length=396bp
CCACGCGTCCGGGGAAGACGATTACCCTGGAGGTGGAGAGTTCGGATACC
ATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCTGA
TCAGCAGAGGCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGCCGTACTC
TTGCTGATTACAACATTCAGAAGGAGTCCACTCTTCATCTCGTCCTCCGT
CTCCGTGGTGGTGGTTTCTGAGGGACGTGTCAATGTATTTTCTGTTCAAG
CTGGTCGCTATGTTGTCTTGTCTTCTTGAAGAAGACTAGTTATCATTGAT
AATATTGTCTTTTGTTTTTATAAGTTGTTTGTTGAACAAGTTATGCTTTC
GAATAAAAATCTCTAGTTCAAATAAAAAAAAAAAAAAAAAAAAAAA
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