EY749268

Overview
NameEY749268
Unique NameEY749268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY749268 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.043e-11
Identity = 23/45 (51.11%), Postives = 39/45 (86.67%), Query Frame = 2 
Query:  281 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPMTDTYVIF 415
            ++ KLG+  +PG++RVT+++ KNILFVI+ P+V+KSP ++TY++F
Sbjct:   61 SIAKLGLTRVPGITRVTLRRPKNILFVINNPEVYKSPTSNTYIVF 105

HSP 2 Score: 28.8758 bits (63), Expect = 6.043e-11
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 3 
Query:  414 FGEAKIEDLSSQLQTQA 464
            FGEAKIEDL+SQ Q  A
Sbjct:  105 FGEAKIEDLNSQAQASA 121
[Close]
BLAST of EY749268 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 6.052e-11
Identity = 24/45 (53.33%), Postives = 40/45 (88.89%), Query Frame = 2 
Query:  281 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPMTDTYVIF 415
            A+ KLG+K +PG++RVT+++ K ILFVI++PDV++SP ++T++IF
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIF 101

HSP 2 Score: 29.6462 bits (65), Expect = 6.052e-11
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 3 
Query:  414 FGEAKIEDLSSQLQTQAGRAI 476
            FGEAKIEDL+SQ Q  A + +
Sbjct:  101 FGEAKIEDLNSQAQASAAQQL 121
The following BLAST results are available for this feature:
BLAST of EY749268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NACA_SCLS16.043e-1151.11Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN6.052e-1153.33Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-071-H10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749268 ID=EY749268; Name=EY749268; organism=Citrus sinensis; type=EST; length=959bp
CCCCCTTACGTCCGTCAATTTTCAAGGTCTTGAGGAATTTGCCTCTGTTT
ATCCCCAAGAAACAGCCATGACTGCTCAGACCCAAGAAGAGCTTCTCGCC
TCTCTTCTCGAACAGCAAAAAATCGATGATGATAAGCCTGTTGTAGAAGA
TGATGAAGATGAAGACGAGGATGAGGATGAAGATGATGAGAAAGACGAAG
ATGAAGCCGATGAGGGGCACCGAGATGGAGAGGCAGGTGGTAGGTCAAAA
CAGAGCAGAAGTGAAAAGAAGAGTCGCAAAGCAATGTTAAAGCTTGGAAT
GAAACCTATCCCTGGTGTTAGCCGGGTTACCGTCAAAAAGAGCAAGAATA
TCTTGTTTGTTATCTCAAAACCGGATGTTTTCAAGAGCCCGATGACAGAT
ACATATGTAATCTTTCGGTGAGGCAAAGATCGAGGACTTGAGCTCACAAT
TGCAGACTCAGGCAGGCAGAGCAATTTAAGGCTCCTGATCTCAGCCACCT
GGTCTCCACACCTGGAGCCTCAGCCATGGCTCCCGACGATGAACAAGCAC
ATGAAAACCGGAAGTGAGCCCTAGGGAATAAAAGTTAGTGATGAAACAGG
GAAGGAGTCTCCAAGCGCAAAGGCTGGGGAAAGCGCCTGAAGGCTCCCAA
ATGGGGGACATAAGTTTCCAGCTTATCCATGGAAGCTTTACCCAACTGGA
AGGTTTTCCTAAAATGGTTTGGGGGGCATTTAAATAAAACCCTCCATAAA
TTTTCCCCATTCAAAGGGGGCCTTGCTCAACCCTACCACTTTTTTGTTTA
TCCCCCCGTGGTTTTATGGGAAATATATTTTCATTTTTTCCACTATGTGG
TGGCCACCTCACCCCACCCATCACCCCAATCGGGGGCGCGCCCACCCTTC
TTTTTGCATGGAGGACACAACCCAGTGGAGGGGAGCCTCAACTACCCCTT
TATTTTTCC
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