EY695521

Overview
NameEY695521
Unique NameEY695521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.481e-65
Identity = 94/147 (63.95%), Postives = 108/147 (73.47%), Query Frame = 1
Query:  280 STTGVSPGEGTGATMSXXXXXXXXXXTNFFDGS--LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHAN 714
            S TG + GEG+GATMS          ++   G     G D  GFGPL+PTESERSLMERVR ELK ELKQG+K +I D+ EEI+RKRRAGKLPGDTT++LK WW  H KW YPT +D A+LV+ETGLQLKQINNW  NQRKRNWH N
Sbjct:  135 SLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 281          

HSP 2 Score: 82.0333 bits (201), Expect = 1.481e-65
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 2
Query:   29 IDAQLSRSRDVLAKYSAVANGRVLDDK-ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTVA 253
            I+AQLS S  +L  Y++ A G    D+ ELD F+  YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLT A
Sbjct:   64 IEAQLSHSHHLLRSYASTAVGFSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGA 139          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX2_MAIZE (Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.312e-38
Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 1
Query:  451 VRHELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHAN 714
            VR ELKHELKQGY++K+VDI EEILRKRRAGKLPGDT S LKAWW +H+KW YPT ED ARLVQETGLQLKQINNW  NQRKRNWH N
Sbjct:    1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHNN 88          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX7_MAIZE (Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.056e-36
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHAN 714
            ELK+ELKQGYKEK+VDI EEI+RKRRAGKLPGDT S+LKAWW +H+KW YPT +D ARLVQETGLQLKQINNW  NQRKRNWH+N
Sbjct:    1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSN 85          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX6_MAIZE (Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.056e-36
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHAN 714
            ELK+ELKQGYKEK+VDI EEI+RKRRAGKLPGDT S+LKAWW +H+KW YPT +D ARLVQETGLQLKQINNW  NQRKRNWH+N
Sbjct:    1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSN 85          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX1_MAIZE (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.686e-34
Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 1
Query:  451 VRHELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHAN 714
            VR ELK ELKQG+K +I D+ EEILRKRRAGKLPGDTTS+LK WW  H+KW YPT +D A+LV+ETGLQLKQINNW  NQRKRNWH N
Sbjct:    1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 88          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOS1_ORYSJ (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica GN=OSH6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  373 GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            GS D     G   ++    E+S      HELK  L + Y   +  +  E L+KR+ GKLP D  S L  WW +H +W YPT ED  RL   TGL  KQINNW  NQRKR+W
Sbjct:  160 GSSDEDQCSGETDMLDIGQEQS-SRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHW 269          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSJ (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.212e-18
Identity = 43/83 (51.81%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  457 HELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            HELK  L + Y   +  +  E L+KR+ GKLP D  S L  WW +H +W YPT ED  RL   TGL  KQINNW  NQRKR+W
Sbjct:  196 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSI (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica GN=OSH71 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.212e-18
Identity = 43/83 (51.81%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  457 HELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            HELK  L + Y   +  +  E L+KR+ GKLP D  S L  WW +H +W YPT ED  RL   TGL  KQINNW  NQRKR+W
Sbjct:  196 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNX11_MAIZE (Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            ELK  L + Y   +  +  E L+KR+ GKLP D  S L  WW +H +W YPT ED  RL   TGL  KQINNW  NQRKR+W
Sbjct:    4 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAATGLDPKQINNWFINQRKRHW 85          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX5_MAIZE (Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.872e-17
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            ELK  L + Y   +  +  E L+KR+ GKLP D  S L  WW +H +W YPT ED  RL   TGL  KQINNW  NQRKR+W
Sbjct:    1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 82          
The following BLAST results are available for this feature:
BLAST of EY695521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
HD1_BRANA1.481e-6563.95Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNOX2_MAIZE7.312e-3881.82Homeobox protein knotted-1-like 2 (Fragment) OS=Ze... [more]
KNOX7_MAIZE1.056e-3681.18Homeobox protein knotted-1-like 7 (Fragment) OS=Ze... [more]
KNOX6_MAIZE1.056e-3681.18Homeobox protein knotted-1-like 6 (Fragment) OS=Ze... [more]
KNOX1_MAIZE1.686e-3475.00Homeobox protein knotted-1-like 1 (Fragment) OS=Ze... [more]
KNOS1_ORYSJ1.297e-1844.14Homeobox protein knotted-1-like 1 OS=Oryza sativa ... [more]
KNOSA_ORYSJ2.212e-1851.81Homeobox protein knotted-1-like 10 OS=Oryza sativa... [more]
KNOSA_ORYSI2.212e-1851.81Homeobox protein knotted-1-like 10 OS=Oryza sativa... [more]
KNX11_MAIZE1.434e-1751.22Homeobox protein knotted-1-like 11 (Fragment) OS=Z... [more]
KNOX5_MAIZE1.872e-1751.22Homeobox protein knotted-1-like 5 (Fragment) OS=Ze... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-D01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695521 ID=EY695521; Name=EY695521; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCCCACGCGTCTGCCAAGATTGATGCTCAGTTGTCTCGGT
CGCGGGATGTCTTGGCTAAGTACTCCGCTGTCGCCAATGGACGCGTGCTC
GATGATAAAGAGCTCGATCAATTCATGACGCATTATGTTCTTTTGCTCTA
TTCCTTTAAAGAACAATTGCAACAACATGTCCGGGTTCATGCAATGGAAG
CGGTAATGGCATGTTGGGATCTTGAGCAATCTTTACAAAGCTTAACTGTG
GCTCAACCTGAACTAAACCATGATGGATGAGCACTACAGGTGTATCTCCT
GGTGAAGGCACAGGTGCAACAATGTCCGATGATGATGAAGACCAGGTAGA
CAGTGACACAAACTTTTTTGATGGAAGTCTGGATGGACCCGATAGCATGG
GATTTGGTCCTCTTGTTCCAACTGAAAGTGAGAGGTCCTTGATGGAGCGT
GTTAGGCACGAACTGAAGCATGAGCTGAAACAGGGTTACAAGGAGAAGAT
TGTTGACATTANGGAAGAAATTCTGCGTAAGAGAAGGGCTGGAAAATTGC
CAGGTGACACCACCTCACTTTTAAAAGCTTGGTGGCTGTCGCATGCTAAG
TGGGCTTATCCAACTGANGAAGACNAGGCAAGATTGGTGCAGGAAACGGG
CTTGCAATTAAAGCAAATAAATAATTGGGTTTATAACCAAAGGAAAAGGA
ATTGGCATGCTAACCCTTCATCTTCACTGCTTCAAAGAGCAAACGCAAGA
AGGAGGCTGTAAATTGATCTTGGTGTCCCCATGCAGAATCAGATTTTATT
ATGACATTTTTCCTAATGTAATTGGGGAAAGAATAATGCAGGTAATCTAG
TAATGAAAATTCATGTTATTGGAACATTTGACAAAGTATGGGCTCTTCTC
CAATTTGGT
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