EY695521

Overview
NameEY695521
Unique NameEY695521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSJ (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica GN=OSH15 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            ELK +L + Y   +  + +E  +K++ GKLP +    L  WW  H KW YP+  +   L + TGL  KQINNW  NQRKR+W
Sbjct:  236 ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSI (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica GN=OSH15 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            ELK +L + Y   +  + +E  +K++ GKLP +    L  WW  H KW YP+  +   L + TGL  KQINNW  NQRKR+W
Sbjct:  236 ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.305e-14
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            ELK +L + Y   + ++ +E+ +KR+  KLP +    L +WW  H +W YP+  +   L + TGL+ KQINNW  NQRKR+W
Sbjct:    4 ELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.447e-13
Identity = 40/118 (33.90%), Postives = 54/118 (45.76%), Query Frame = 1
Query:  370 DGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIXEEILRKRR--AGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHANP 717
            D S D  D +  G  +P +S       V    +  L   Y   +  +  EI  K++   G LP D    L  WW  H +W YP+  + A L + TGL  KQ+ NW  NQRKR+W   P
Sbjct:  177 DVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKPKP 292          

HSP 2 Score: 25.409 bits (54), Expect = 2.447e-13
Identity = 15/49 (30.61%), Postives = 26/49 (53.06%), Query Frame = 2
Query:  104 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTV 250
            D ELDQFM  Y  +L  + ++L + ++    EA      +E+ + SL +
Sbjct:  130 DPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSLAL 174          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  460 ELKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWW-LSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNWHANP 717
            +LKH+L   Y   + D+ +   ++ + GKLP +    L  WW L + KW YP+  +   L Q TGL  KQI+NW  NQRKR+W   P
Sbjct:  208 QLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTP 294          
BLAST of EY695521 vs. ExPASy Swiss-Prot
Match: KNOS7_ORYSJ (Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica GN=OSH3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11
Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
Query:  463 LKHELKQGYKEKIVDIXEEILRKRRAGKLPGDTTSLLKAWWLSHAKWAYPTXEDXARLVQETGLQLKQINNWVYNQRKRNW 705
            LK  L + Y   +  + +E+ +KR+ GKLP +    L  WW  H +W  P+  +   L + TGL+ KQINN   NQRKR+W
Sbjct:  228 LKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHW 308          
The following BLAST results are available for this feature:
BLAST of EY695521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
KNOSC_ORYSJ1.938e-1442.68Homeobox protein knotted-1-like 12 OS=Oryza sativa... [more]
KNOSC_ORYSI1.938e-1442.68Homeobox protein knotted-1-like 12 OS=Oryza sativa... [more]
KNOX3_MAIZE3.305e-1441.46Homeobox protein knotted-1-like 3 (Fragment) OS=Ze... [more]
KNOS5_ORYSJ2.447e-1333.90Putative homeobox protein knotted-1-like 5 OS=Oryz... [more]
KNOS9_ORYSJ6.233e-1340.23Homeobox protein knotted-1-like 9 OS=Oryza sativa ... [more]
KNOS7_ORYSJ2.005e-1139.51Homeobox protein knotted-1-like 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-D01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695521 ID=EY695521; Name=EY695521; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCCCACGCGTCTGCCAAGATTGATGCTCAGTTGTCTCGGT
CGCGGGATGTCTTGGCTAAGTACTCCGCTGTCGCCAATGGACGCGTGCTC
GATGATAAAGAGCTCGATCAATTCATGACGCATTATGTTCTTTTGCTCTA
TTCCTTTAAAGAACAATTGCAACAACATGTCCGGGTTCATGCAATGGAAG
CGGTAATGGCATGTTGGGATCTTGAGCAATCTTTACAAAGCTTAACTGTG
GCTCAACCTGAACTAAACCATGATGGATGAGCACTACAGGTGTATCTCCT
GGTGAAGGCACAGGTGCAACAATGTCCGATGATGATGAAGACCAGGTAGA
CAGTGACACAAACTTTTTTGATGGAAGTCTGGATGGACCCGATAGCATGG
GATTTGGTCCTCTTGTTCCAACTGAAAGTGAGAGGTCCTTGATGGAGCGT
GTTAGGCACGAACTGAAGCATGAGCTGAAACAGGGTTACAAGGAGAAGAT
TGTTGACATTANGGAAGAAATTCTGCGTAAGAGAAGGGCTGGAAAATTGC
CAGGTGACACCACCTCACTTTTAAAAGCTTGGTGGCTGTCGCATGCTAAG
TGGGCTTATCCAACTGANGAAGACNAGGCAAGATTGGTGCAGGAAACGGG
CTTGCAATTAAAGCAAATAAATAATTGGGTTTATAACCAAAGGAAAAGGA
ATTGGCATGCTAACCCTTCATCTTCACTGCTTCAAAGAGCAAACGCAAGA
AGGAGGCTGTAAATTGATCTTGGTGTCCCCATGCAGAATCAGATTTTATT
ATGACATTTTTCCTAATGTAATTGGGGAAAGAATAATGCAGGTAATCTAG
TAATGAAAATTCATGTTATTGGAACATTTGACAAAGTATGGGCTCTTCTC
CAATTTGGT
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