EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.106e-44
Identity = 79/111 (71.17%), Postives = 94/111 (84.68%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY   K+RPFF+GL +F++SGPV+AMVWEGEGVI   RKLIGAT P  +EPGTIRGDLAV +GR
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGR 113          

HSP 2 Score: 31.187 bits (69), Expect = 5.106e-44
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSDG +T   EI LWF
Sbjct:  113 RNVIHGSDGSDTAVFEINLWF 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.130e-43
Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTF+AIKPDGVQRG +S+II RFE+KGFKLV +K ++P+K+ AQ HY   +ERPFF  L EF+SSGPV+AM+WEGEGVI   RKLIGAT P  +EPGTIRGDLA+ +GR
Sbjct:    4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGR 113          

HSP 2 Score: 35.8094 bits (81), Expect = 1.130e-43
Identity = 15/24 (62.50%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + IIHGSDG ET K EI LWF  +
Sbjct:  113 RNIIHGSDGEETAKFEINLWFNQD 136          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.130e-43
Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTF+AIKPDGVQRGL+ EI+SRFERKGFKL+A+K ++PS+  A++HY   +ERPFF GL +F++SGPVIAM+WEGEGVI   RKLIG+T P  ++PGTIRGDLA+ +GR
Sbjct:    4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGR 113          

HSP 2 Score: 35.4242 bits (80), Expect = 1.130e-43
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSDGPET   EI LWF
Sbjct:  113 RNVIHGSDGPETASFEIGLWF 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.258e-43
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTF+AIKPDGVQRG I+EII RFE+KGFKLV +K ++PSK+ AQ HY   +ERPFF  L  F+SSGPV+AM+WEGEGVI   RK+IGAT P  +EPGTIRGDLA+ +GR
Sbjct:    4 ERTFLAIKPDGVQRGYIAEIIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGR 113          

HSP 2 Score: 35.4242 bits (80), Expect = 3.258e-43
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + IIHGSDG ET K EI LWF
Sbjct:  113 RNIIHGSDGEETAKFEINLWF 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.596e-42
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+  A++HY   KERPFF GL +F++SGPV+AMVWEG+GVI   RKLIGAT P  +EPGTIRGDLAV +GR
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGR 112          

HSP 2 Score: 30.4166 bits (67), Expect = 1.596e-42
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSD  ET + EI LWF
Sbjct:  112 RNVIHGSDAAETAQFEIGLWF 132          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACAM1 (Nucleoside diphosphate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=ndk PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.079e-42
Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERTF+A+KPDGVQRGL+ EIISR+E KGF LV +K++V S+E A++HY + KE+PFF+GL +F++SGPV+AMVWEG+GV+   RK+IGAT+P  SEPGTIRGD  + +GR
Sbjct:    1 MERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGR 111          

HSP 2 Score: 33.113 bits (74), Expect = 2.079e-42
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + IIHGSD  ET + EI+LWF  E
Sbjct:  111 RNIIHGSDAVETAQREISLWFKSE 134          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.815e-42
Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TFI IKPDGVQRGL+ EIISRFE+KGF L A+K V   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+GV+  GRKLIGAT+P  SEPGTIRGD A+ +GR
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGR 111          

HSP 2 Score: 28.1054 bits (61), Expect = 7.815e-42
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSD  ++   EI LWF
Sbjct:  111 RNVIHGSDAVDSATKEIALWF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.018e-41
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERTFIAIKPDGVQRGL+ +IISRFE KGF LV +KI+  +KE A+KHY   KERPFF+ L EF+ SGP++AMVWEGEGV+   RK+IGAT+P  +EPGTIRGD  + +GR
Sbjct:    1 MERTFIAIKPDGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPLVAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGR 111          

HSP 2 Score: 31.9574 bits (71), Expect = 1.018e-41
Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + +IHGSD  ET + EI LWF  E
Sbjct:  111 RNLIHGSDAIETAQTEINLWFKEE 134          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.018e-41
Identity = 74/111 (66.67%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TFI IKPDGVQRGL+ EIISRFE+KGF L A+K +   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+GV+  GRK+IGAT+P  SEPGTIRGD A+ +GR
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGR 111          

HSP 2 Score: 29.261 bits (64), Expect = 1.018e-41
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSD  E+   EI LWF
Sbjct:  111 RNVIHGSDAVESATKEIALWF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.728e-41
Identity = 71/111 (63.96%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERTF+A+KPDGVQR L+ EII RFE KGFKLV +K++  SK+ A++HY + KE+PFF GL +F++SGPV+AMVWEG+GV+   RK+IGAT+P  SEPGTIRGD  V +GR
Sbjct:    1 MERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGR 111          

HSP 2 Score: 33.8834 bits (76), Expect = 1.728e-41
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTP 738
            + IIHGSD  ET + EI LWF P
Sbjct:  111 RNIIHGSDAVETAQREIALWFQP 133          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PROM15.106e-4471.17Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMP1.130e-4368.18Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM41.130e-4367.27Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM53.258e-4368.18Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_SYNSC1.596e-4270.00Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_ACAM12.079e-4263.96Nucleoside diphosphate kinase OS=Acaryochloris mar... [more]
NDK1_SPIOL7.815e-4268.47Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK_TRIEI1.018e-4166.67Nucleoside diphosphate kinase OS=Trichodesmium ery... [more]
NDK1_MESCR1.018e-4166.67Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_CYAP41.728e-4163.96Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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