EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.311e-39
Identity = 84/150 (56.00%), Postives = 104/150 (69.33%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYES 787
            +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A +HY   +ERPFF GL +F++SGPV+AMVWEG+GVI   RKLIGAT P  +EPGTIRGDLAV +GR        P  A+   +    P  L  +T   + W  ES
Sbjct:    3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVES 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.712e-39
Identity = 80/122 (65.57%), Postives = 94/122 (77.05%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+  A++HY   KERPFF GL +F++SGPV+AMVWEG+GVI   RKLIGAT P  +EPGTIRGDLAV +GR       AP  A
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETA 124          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.012e-39
Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 2
Query:  338 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            E+E T+I IKPDGVQRGL+ EIISRFE+KGFKL  +K+    KE A++HY DL+ +PFF  L ++++SGPV+ M WEG GV+   RKLIGAT+P  +EPGTIRGDLAV  GR
Sbjct:   83 EVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGR 194          

HSP 2 Score: 33.4982 bits (75), Expect = 2.012e-39
Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF--------TP--ETWLI 753
            + ++HGSD P+  K EI LWF        TP  E WLI
Sbjct:  194 RNVVHGSDSPDNGKREIALWFGEGELCSWTPVQEPWLI 231          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.025e-39
Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TFI IKPDGVQRGLI E+I RFE+KGF L  +K++   + FA+KHY DL  + FF+GL +++ SGPV+AM+WEG+ V+  GRK+IGAT+P  SEPGTIRGD A+ +GR
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGR 111          

HSP 2 Score: 31.187 bits (69), Expect = 2.025e-39
Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFT--PETW 747
            + +IHGSD  E+ + EI LWF   P  W
Sbjct:  111 RNVIHGSDSVESARKEIALWFPDGPVNW 138          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.921e-39
Identity = 80/122 (65.57%), Postives = 93/122 (76.23%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+  A++HY   KERPFF GL  F++SGPV+AMVWEG+GVI   RKLIGAT P  SEPGTIRGDLAV +GR       AP  A
Sbjct:    3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETA 124          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.449e-39
Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = 2
Query:  188 AAVTFSGKLPYLVSSFGRAGSSTASRSWLSGAIAIPAAAYMLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            A V F   L      F     ++ASR  L  + +  +  + L        ++E T+I +KPDG+QRGL+ EIISRFE+KGFKL+ +K+    KE A++HY DL  + FF  L E+++SGPV+ M WEG GV+   RKLIG TDP ++EPGTIRGDLAV  GR
Sbjct:   33 ARVNFRTALAAFRPQFRLFSRNSASRRRLRASSSAESGIF-LPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGR 193          

HSP 2 Score: 33.113 bits (74), Expect = 4.449e-39
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + I+HGSD PE  K EI LWF
Sbjct:  193 RNIVHGSDSPENGKREIGLWF 213          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.841e-39
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 2
Query:  353 FIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            FI IKPDGVQRGL+ EIISRFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+GV+  GRK+IGAT+P  S  GTIRGD A+ +GR
Sbjct:    1 FIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGR 107          

HSP 2 Score: 30.4166 bits (67), Expect = 5.841e-39
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSD  E+ + EI LWF
Sbjct:  107 RNVIHGSDAVESARKEIALWF 127          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 7.550e-39
Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 2
Query:  338 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ++E T+I IKPDGVQRGL+ EIISRFE+KGFKL+ +K+    KE A++HY DLK + F+  L ++++SGPV+ M WEG GV+   RKLIGATDP ++EPGTIRGDLAV  GR
Sbjct:   84 QVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPVVCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGR 195          

HSP 2 Score: 31.5722 bits (70), Expect = 7.550e-39
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + ++HGSD P+  K EI LWF
Sbjct:  195 RNVVHGSDSPDNGKREIGLWF 215          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.110e-38
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHPRLG*YTXHAEKWVYE 784
            ME+TFI IKPDGVQRGL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL +++ SGPV+AMVWEG+GV+T GRK+IGAT+P  S PGTIRGD A+ +GR       A   AR          +  +      W+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.190e-38
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            E+TFIAIKPDGVQRGLI  IISRFE +GFKLVA+K+V P +   ++HY DL ++PFF GL  ++ SGP+ AMVWEG  V+  GR ++GAT+P  S PGTIRGD A+ VGR
Sbjct:    4 EQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGR 113          

HSP 2 Score: 33.4982 bits (75), Expect = 2.190e-38
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + + HGSD  E  K EI LWF PE
Sbjct:  113 RNVCHGSDSVENAKKEIALWFKPE 136          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PROM31.311e-3956.00Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_SYNPX1.712e-3965.57Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK2_TOBAC2.012e-3961.61Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK1_ARATH2.025e-3960.36Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDK_SYNS92.921e-3965.57Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK2_ARATH4.449e-3946.91Nucleoside diphosphate kinase II, chloroplastic OS... [more]
NDK_SOLLC5.841e-3963.55Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]
NDK2_SPIOL7.550e-3960.71Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK1_TOBAC1.110e-3852.03Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK_ASPFU2.190e-3861.82Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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