EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CLOPS (Nucleoside diphosphate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=ndk PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.662e-20
Identity = 42/107 (39.25%), Postives = 74/107 (69.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAV 661
            +E++ + IKPD V+R LI +I+  +E  G K+ A+++   +K+FA+KHY + +++ FFN L ++++  P++A++ EGE  I   R L GAT+P+++E GTIR   A+
Sbjct:    3 LEKSLVLIKPDAVERNLIGKILEVYEGAGLKIKAMEMKQINKDFAEKHYEEHRDKQFFNSLIKYITRSPLVALILEGEDAIDKIRSLNGATNPEKAEFGTIRRRFAL 109          

HSP 2 Score: 25.409 bits (54), Expect = 1.662e-20
Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  643 QRRSSCCCWKRIIHGSDGPETRKDEITLWF 732
            +RR +    +  +H SD  E+ + EI LWF
Sbjct:  104 RRRFALSGTENSVHASDSIESAEKEIKLWF 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_NOCSJ (Nucleoside diphosphate kinase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.665e-20
Identity = 42/105 (40.00%), Postives = 67/105 (63.81%), Query Frame = 2
Query:  347 RTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAV 661
            RT + +KPD V+RGL+  I+SR+E KG  +VA++        A +HY +   + F+  L +F++ GP++A+V EG+  +   R L GATD  ++ PGTIRGD ++
Sbjct:    4 RTLVLLKPDAVRRGLVGAILSRYEAKGLTIVAMEQRTIDAAVADQHYAEHVAKEFYPPLRDFVTGGPLVALVLEGDNSVDVVRLLNGATDGSKAAPGTIRGDFSL 108          

HSP 2 Score: 30.4166 bits (67), Expect = 1.665e-20
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + ++HGSD PE+ + EI +WF
Sbjct:  112 ENLVHGSDSPESAEREIGIWF 132          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_STRMK (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=ndk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.780e-20
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I EI +RFE+ G K+VA K    S+  A+  Y   +ERPFFN L EF+ SGPV+    EGE  +   R L+GAT+P+ + PGTIR D A
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_STRM5 (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=ndk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.780e-20
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I EI +RFE+ G K+VA K    S+  A+  Y   +ERPFFN L EF+ SGPV+    EGE  +   R L+GAT+P+ + PGTIR D A
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_POLNS (Nucleoside diphosphate kinase OS=Polynucleobacter necessarius (strain STIR1) GN=ndk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.780e-20
Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I  RFE  G K+VA K+   S+  A++ Y   K+RPFF  L  F+ SGPV+  V +GEG I   R L+GATDP+++E GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYDRFESAGLKIVASKMAHLSQNEAEQFYGVHKDRPFFKDLVSFMISGPVMIQVLQGEGAIAKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CHLPB (Nucleoside diphosphate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=ndk PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.163e-20
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIR 646
            MERT   +KPD V++ LI  +I + ER GF++VA+K    + E A   Y   +ERPFF  L EF+SSGP + M+ E E  +   RKLIGATDP  +E GT+R
Sbjct:    1 MERTLTILKPDCVRKQLIGAVIDKIERAGFRVVAMKKTKLTTETAGAFYAVHRERPFFGELVEFMSSGPCVPMILEKENAVEDFRKLIGATDPAEAEEGTVR 102          

HSP 2 Score: 23.483 bits (49), Expect = 2.163e-20
Identity = 9/24 (37.50%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + I+HGSD  E  + E + +F+ E
Sbjct:  111 ENIVHGSDSEENAQIESSFFFSTE 134          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_MIMIV (Nucleoside diphosphate kinase OS=Acanthamoeba polyphaga mimivirus GN=NDK PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.165e-20
Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPS-KEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            M+RT + IKPD  +R L++EI+ R E+K FK+V++K    + +   ++HY +  E+ +FN  C+F+ SGP+I++V+EG   I+  R+L G        PGTIRGDLA
Sbjct:    1 MQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIVYEGTDAISKIRRLQG----NILTPGTIRGDLA 103          

HSP 2 Score: 29.261 bits (64), Expect = 2.165e-20
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPET 744
            + +IH SD  ++  DEI++WF PET
Sbjct:  108 ENLIHASDSEDSAVDEISIWF-PET 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_FRATO (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +RT   IKPD V++ +I EI SRFE+ G +++A K+   SK  A+  Y   K+RPFF+ L EF+ SGPV+  V EGE  I   R+L+GAT+P+ ++ GTIR D A
Sbjct:    4 QRTLSIIKPDAVEKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAEGFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_FRATN (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. novicida (strain U112) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +RT   IKPD V++ +I EI SRFE+ G +++A K+   SK  A+  Y   K+RPFF+ L EF+ SGPV+  V EGE  I   R+L+GAT+P+ ++ GTIR D A
Sbjct:    4 QRTLSIIKPDAVEKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAEGFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_FRATH (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +RT   IKPD V++ +I EI SRFE+ G +++A K+   SK  A+  Y   K+RPFF+ L EF+ SGPV+  V EGE  I   R+L+GAT+P+ ++ GTIR D A
Sbjct:    4 QRTLSIIKPDAVEKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAEGFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFA 108          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_CLOPS1.662e-2039.25Nucleoside diphosphate kinase OS=Clostridium perfr... [more]
NDK_NOCSJ1.665e-2040.00Nucleoside diphosphate kinase OS=Nocardioides sp. ... [more]
NDK_STRMK1.780e-2048.11Nucleoside diphosphate kinase OS=Stenotrophomonas ... [more]
NDK_STRM51.780e-2048.11Nucleoside diphosphate kinase OS=Stenotrophomonas ... [more]
NDK_POLNS1.780e-2043.90Nucleoside diphosphate kinase OS=Polynucleobacter ... [more]
NDK_CHLPB2.163e-2048.04Nucleoside diphosphate kinase OS=Chlorobium phaeob... [more]
NDK_MIMIV2.165e-2042.06Nucleoside diphosphate kinase OS=Acanthamoeba poly... [more]
NDK_FRATO2.325e-2047.62Nucleoside diphosphate kinase OS=Francisella tular... [more]
NDK_FRATN2.325e-2047.62Nucleoside diphosphate kinase OS=Francisella tular... [more]
NDK_FRATH2.325e-2047.62Nucleoside diphosphate kinase OS=Francisella tular... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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