EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.716e-38
Identity = 66/110 (60.00%), Postives = 87/110 (79.09%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTF+A+KPDGV RGL+ EII+R+E+KGF LV +K +VP+K+ A+ HY + KERPFF GL  F++SGPV+AMV+EG+GV+   R +IG T+P  S PG+IRGD  V VGR
Sbjct:    9 ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGR 118          

HSP 2 Score: 34.2686 bits (77), Expect = 3.716e-38
Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPETWL 750
            + IIHGSD  E+   EI LWF PE  L
Sbjct:  118 RNIIHGSDSVESANREIALWFKPEELL 144          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.218e-38
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            MERTFIAIKPDGVQRGL+  II RFE+KGFKLV +K + PS+E A++HY   +ERPFFNGL EF++SGP++A+V EGEGV+   RKLIGAT+P  +EPGTIRGD  V +GR       A   A+        P  L  +T   + W+YE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.218e-38
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            MERTFIAIKPDGVQRGL+  II RFE+KGFKLV +K + PS+E A++HY   +ERPFFNGL EF++SGP++A+V EGEGV+   RKLIGAT+P  +EPGTIRGD  V +GR       A   A+        P  L  +T   + W+YE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.218e-38
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHPRLG*YTXHAEKWVYE 784
            ME+TFI IKPDGVQRGL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGPV++MVWEG+GV+T GRK+IGAT+P  S PGTIRGD A+ +GR       A   AR          +  +      W+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.397e-38
Identity = 76/148 (51.35%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHPRLG*YTXHAEKWVYE 784
            ME+TFI IKPDGVQRGL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+ V+T GRK+IGAT+P  S PGTIRGD A+ +GR       A   A+          +  ++     W+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.397e-38
Identity = 76/148 (51.35%), Postives = 98/148 (66.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHPRLG*YTXHAEKWVYE 784
            ME TFI IKPDGVQRGL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+ V+T GRK+IGAT+P  S PGTIRGD A+ +GR       A   A+          +  ++     W+YE
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.064e-37
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 2
Query:  158 YSEGRAVSAAAAVTFSGKLPYLVSSFGRAGSSTASRSWLSGAIAIPAAAYMLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            YS+ R     +A +    L    S+      +  +RS     I +P     L++       +++ +I +KPDGVQRGL+ EIISRFE+KGFKL  +K+   SKE A++HY  L ++ FF  L E+++SGPV++M WEG GV+   RKLIGATDP ++EPGTIRGD AV  GR
Sbjct:   28 YSQLRTTQNLSAFSSKSHLFSPSSTSSSYPKTFRTRSSTESGIFLPRLITSLEQ-------VDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGR 192          

HSP 2 Score: 32.7278 bits (73), Expect = 1.064e-37
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + IIHGSD PE  + EI LWF
Sbjct:  192 RNIIHGSDSPENGEREIALWF 212          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.571e-37
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A +ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K +  S+E  ++HY DLK+RPFF GL ++++SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       +   A    H    P  L  Y   A  WVYE
Sbjct:    2 ANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.663e-37
Identity = 80/149 (53.69%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMR-SHCGSHPRLG*YTXHAEKWVYE 784
            MERTF+AIKPDGVQRGL+ EII RFE KGF LV +K +  SKE A++HY   +ERPFF  L EF++SGPV+AMVWEG+GVI   RK+IGAT+P  +EPGTIRGD  + +GR       AP  A+   S   +   L  +  H   W++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.663e-37
Identity = 80/149 (53.69%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMR-SHCGSHPRLG*YTXHAEKWVYE 784
            MERTF+AIKPDGVQRGL+ EII RFE KGF LV +K +  SKE A++HY   +ERPFF  L EF++SGPV+AMVWEG+GVI   RK+IGAT+P  +EPGTIRGD  + +GR       AP  A+   S   +   L  +  H   W++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDKC_DICDI3.716e-3860.00Nucleoside diphosphate kinase, cytosolic OS=Dictyo... [more]
NDK_SYNP64.218e-3855.03Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNE74.218e-3855.03Nucleoside diphosphate kinase OS=Synechococcus elo... [more]
NDK_CAPAN4.218e-3852.03Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK_HELAN9.397e-3851.35Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDKB_FLABI9.397e-3851.35Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK2_PEA1.064e-3744.19Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDKB_MOUSE3.571e-3752.98Nucleoside diphosphate kinase B OS=Mus musculus GN... [more]
NDK_ANAVT4.663e-3753.69Nucleoside diphosphate kinase OS=Anabaena variabil... [more]
NDK_ANASP4.663e-3753.69Nucleoside diphosphate kinase OS=Anabaena sp. (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
back to top