EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_FRATF (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +RT   IKPD V++ +I EI SRFE+ G +++A K+   SK  A+  Y   K+RPFF+ L EF+ SGPV+  V EGE  I   R+L+GAT+P+ ++ GTIR D A
Sbjct:    4 QRTLSIIKPDAVEKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAEGFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_DECAR (Nucleoside diphosphate kinase OS=Dechloromonas aromatica (strain RCB) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I SRFE  G K++A ++   S++ A + Y   KERPFF  L  F++SGPV+    EGE  I   R+L+GATDP++++ GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYSRFESNGLKVIAARMTWLSEQEAGQFYSVHKERPFFKDLVSFMTSGPVMIQALEGENAIAKNRELMGATDPKKADAGTIRADFAESIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CAMLR (Nucleoside diphosphate kinase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            ME+T   IKPD V++G+I +I++RFE  G ++ A K +  S++ AQ+ Y   K+RPFF  L EF+ SGPV+  V EG+  +   R+L+GAT+P+ +  GTIR D A
Sbjct:    1 MEKTLSIIKPDAVKKGVIGQILTRFESNGLRIAATKKIQLSEKEAQEFYAVHKDRPFFKDLVEFMISGPVVVSVLEGKNAVLKNRELMGATNPKEAAAGTIRADFA 106          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURVG (Nucleoside diphosphate kinase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURS3 (Nucleoside diphosphate kinase OS=Burkholderia sp. (strain 383) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURCJ (Nucleoside diphosphate kinase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURCH (Nucleoside diphosphate kinase OS=Burkholderia cenocepacia (strain HI2424) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURCC (Nucleoside diphosphate kinase OS=Burkholderia cenocepacia (strain MC0-3) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURCA (Nucleoside diphosphate kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++   S+  A+K Y     RPFF  L +F+ SGPV+  V EGEG I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I +RFE  G K+ A +++  S+  A++ Y   KERPFF  L +F+ SGPV+    EGE  +   R+L+GATDP+++ PGTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFA 108          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_FRATF2.325e-2047.62Nucleoside diphosphate kinase OS=Francisella tular... [more]
NDK_DECAR2.325e-2042.28Nucleoside diphosphate kinase OS=Dechloromonas aro... [more]
NDK_CAMLR2.325e-2045.28Nucleoside diphosphate kinase OS=Campylobacter lar... [more]
NDK_BURVG2.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia viet... [more]
NDK_BURS32.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia sp. ... [more]
NDK_BURCJ2.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia cepa... [more]
NDK_BURCH2.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia ceno... [more]
NDK_BURCC2.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia ceno... [more]
NDK_BURCA2.325e-2049.06Nucleoside diphosphate kinase OS=Burkholderia ceno... [more]
NDK_ACISJ2.325e-2045.28Nucleoside diphosphate kinase OS=Acidovorax sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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