EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_WOLTR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 48/106 (45.28%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   +KPD V+  +I  I S  E+ G +++A K+++ +K+ A+  Y   K+RPFF GL EF++SGPVI  V  GE  I+  R+++GATDP++++ GTIRGD A
Sbjct:    3 IERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SHEWM (Nucleoside diphosphate kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKPD V +  I  I +RFE  G K++A K+V  SKE A+  Y +  ERPFF  L  F++SGP++    EGE  +   R ++GAT+P  + PGTIR D A
Sbjct:    3 IERTFSIIKPDAVAKNNIGAIYNRFETAGLKIIASKMVHLSKEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHRDILGATNPAEAAPGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_RHOSK (Nucleoside diphosphate kinase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD  +R L  +I ++FE  G ++VA K +  S   AQK Y   K+RPFF  L EF++S PV+  V EGEG I   R+++GAT+P  ++ GTIR + A+ VG  S     AP  A
Sbjct:    3 IERTLSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHLSLAQAQKFYGVHKDRPFFGELTEFMASEPVVVQVLEGEGAIAKNREVMGATNPANADAGTIRKEFALSVGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_RHOS4 (Nucleoside diphosphate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD  +R L  +I ++FE  G ++VA K +  S   AQK Y   K+RPFF  L EF++S PV+  V EGEG I   R+++GAT+P  ++ GTIR + A+ VG  S     AP  A
Sbjct:    3 IERTLSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHLSLAQAQKFYGVHKDRPFFGELTEFMASEPVVVQVLEGEGAIAKNREVMGATNPANADAGTIRKEFALSVGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_RHOS1 (Nucleoside diphosphate kinase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD  +R L  +I ++FE  G ++VA K +  S   AQK Y   K+RPFF  L EF++S PV+  V EGEG I   R+++GAT+P  ++ GTIR + A+ VG  S     AP  A
Sbjct:    3 IERTLSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHLSLAQAQKFYGVHKDRPFFGELTEFMASEPVVVQVLEGEGAIAKNREVMGATNPANADAGTIRKEFALSVGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_POLSJ (Nucleoside diphosphate kinase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I +RFE  G K+VA K+   SK  A+  Y   KERPFF  L  F+ SGPV+    EGEG I   R L+GATDP+++  GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKVVAAKMAHLSKGEAEAFYAVHKERPFFKDLVSFMISGPVMIQALEGEGAILKNRDLMGATDPKKAAAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CAMFF (Nucleoside diphosphate kinase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            ME+T   IKPD V++G++ +II RFE  G ++ A K +  S E A+K Y     RPF+  L EF++SGPV+ MV EG+  +   R+L+GAT+P+ +  GTIR D A
Sbjct:    1 MEQTLSIIKPDAVKKGVVGKIIDRFESNGLRIAAAKKLQLSVEDAKKFYEVHAARPFYGELVEFMTSGPVVVMVLEGDNAVVKNRELMGATNPKEAAAGTIRADFA 106          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURPP (Nucleoside diphosphate kinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I SRFE  G K+VA ++V  S+  A+K Y     RPFF  L +F+ SGPV+    EGE  I   R L+GATDP+++E GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKAEKGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_AZOSE (Nucleoside diphosphate kinase OS=Azoarcus sp. (strain EbN1) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I  RFE  G K++A K+V  S+  A + Y   KERPFF  L  F+ SGPV+  V EGE  I   R L+GATDP++++ GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYQRFEDAGLKIIASKMVHLSEREAGQFYAVHKERPFFKDLVSFMISGPVMIQVLEGESAIATNRDLMGATDPKKADAGTIRADFAESIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIBY (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AYE) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_WOLTR5.180e-2045.28Nucleoside diphosphate kinase OS=Wolbachia sp. sub... [more]
NDK_SHEWM5.180e-2046.23Nucleoside diphosphate kinase OS=Shewanella woodyi... [more]
NDK_RHOSK5.180e-2043.90Nucleoside diphosphate kinase OS=Rhodobacter sphae... [more]
NDK_RHOS45.180e-2043.90Nucleoside diphosphate kinase OS=Rhodobacter sphae... [more]
NDK_RHOS15.180e-2043.90Nucleoside diphosphate kinase OS=Rhodobacter sphae... [more]
NDK_POLSJ5.180e-2049.06Nucleoside diphosphate kinase OS=Polaromonas sp. (... [more]
NDK_CAMFF5.180e-2045.28Nucleoside diphosphate kinase OS=Campylobacter fet... [more]
NDK_BURPP5.180e-2048.11Nucleoside diphosphate kinase OS=Burkholderia phyt... [more]
NDK_AZOSE5.180e-2043.90Nucleoside diphosphate kinase OS=Azoarcus sp. (str... [more]
NDK_ACIBY5.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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