EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIBT (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ndk PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIBS (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain SDF) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIBC (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ACICU) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIB5 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB0057) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIB3 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   +KPD V +  I EI +RFE+ G K+VA K+   S+  A+  Y + KER FF  L  F++SGPV+  V EGE  +   R+++GAT+P+ + PGTIR D AV +
Sbjct:    3 IERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_YERE8 (Nucleoside diphosphate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKP+ V +  I  I +RFE  GFK++A K++  +KE A+  Y + K RPFF+GL EF++SGPV+  V EGE  +   R ++GAT+P  +  GT+R D A
Sbjct:    3 VERTFSIIKPNAVAKNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPVMIQVLEGENAVQRHRDIMGATNPDNALAGTLRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_STRGG (Nucleoside diphosphate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKG-FKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVV 664
            +RT + +KPD V+RGLI EI+ R ERK  +++ A+++        ++HY + K RPF+  L EF+ SGPV+A+V EGE VI   R L G TDP  + PG+IRGD   +
Sbjct:    3 QRTLVLLKPDAVRRGLIGEIVGRIERKADWRITALELRTLDHGTLEQHYGEHKGRPFYEPLMEFMQSGPVVALVAEGERVIEGVRTLAGPTDPIAAAPGSIRGDFGTI 110          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SHESH (Nucleoside diphosphate kinase OS=Shewanella sediminis (strain HAW-EB3) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKPD V +  I  I +RFE  G K++A K++  SKE A+  Y +  ERPFF  L EF++SGP+   V EGE  +   R+++GAT+P  +  GTIR D A
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMLHLSKEQAEGFYAEHSERPFFGALVEFMTSGPICVQVLEGENAVLANREIMGATNPAEAARGTIRSDFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_RHOFD (Nucleoside diphosphate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I +RFE  G K+VA K+   S   AQ  Y   K+RPFF  L +F+ SGPV+    EGE  +   R L+GATDP+++ PGTIR D A
Sbjct:    3 VERTLSIIKPDAVAKNVIGQIYARFEAAGLKVVAAKMAHLSAREAQAFYAVHKDRPFFKDLVDFMISGPVMIQALEGENAVLKNRDLMGATDPKKAAPGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUSU (Nucleoside diphosphate kinase OS=Brucella suis GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ACIBT5.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBS5.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBC5.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIB55.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIB35.180e-2044.95Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_YERE86.765e-2046.23Nucleoside diphosphate kinase OS=Yersinia enteroco... [more]
NDK_STRGG6.765e-2045.37Nucleoside diphosphate kinase OS=Streptomyces gris... [more]
NDK_SHESH6.765e-2046.23Nucleoside diphosphate kinase OS=Shewanella sedimi... [more]
NDK_RHOFD6.765e-2047.17Nucleoside diphosphate kinase OS=Rhodoferax ferrir... [more]
NDK_BRUSU6.765e-2043.09Nucleoside diphosphate kinase OS=Brucella suis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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