EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUSI (Nucleoside diphosphate kinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUO2 (Nucleoside diphosphate kinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYTVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUMB (Nucleoside diphosphate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_AZOSB (Nucleoside diphosphate kinase OS=Azoarcus sp. (strain BH72) GN=ndk PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I  RFE  G K++A K+V  S++ A + Y   KERPF+  L  F++SGPV+    EGE  I   R+L+GATDP++++ GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYQRFEDAGLKIIAAKMVHLSEQEAGQFYAVHKERPFYKDLVSFMTSGPVMIQCLEGENAIAKNRELMGATDPKKADAGTIRADFADSIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BEII9 (Nucleoside diphosphate kinase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.056e-20
Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  +KPD  +R L   + +  E+ G +++A K V+ +K  A+  Y     RPFF  L E + SGPV+  V EGE  I   R+++GATDP +++ GTIR + A+ VG  S     AP  A
Sbjct:    3 IERTFSILKPDVTRRNLTGAVNALIEKAGLRIIAQKRVLITKAQAETFYAVHSARPFFGELVESMISGPVVVQVLEGEDAIKKYREVLGATDPAKADAGTIRKEFALSVGENSAHGSDAPETA 125          

HSP 2 Score: 27.7202 bits (60), Expect = 8.056e-20
Identity = 11/17 (64.71%), Postives = 11/17 (64.71%), Query Frame = 1
Query:  682 HGSDGPETRKDEITLWF 732
            HGSD PET   EI  WF
Sbjct:  117 HGSDAPETAAVEIAQWF 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_YERPB (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKP+ V    I  I +RFE  GFK++A K++  +KE A+  Y + K RPFF+GL EF++SGP++  V EGE  +   R ++GAT+P  +  GT+R D A
Sbjct:    3 LERTFSIIKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFA 108          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BRUSI6.765e-2043.09Nucleoside diphosphate kinase OS=Brucella suis (st... [more]
NDK_BRUO26.765e-2043.09Nucleoside diphosphate kinase OS=Brucella ovis (st... [more]
NDK_BRUMB6.765e-2043.09Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_BRUC26.765e-2043.09Nucleoside diphosphate kinase OS=Brucella canis (s... [more]
NDK_BRUAB6.765e-2043.09Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA26.765e-2043.09Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA16.765e-2043.09Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_AZOSB6.765e-2042.28Nucleoside diphosphate kinase OS=Azoarcus sp. (str... [more]
NDK_BEII98.056e-2039.84Nucleoside diphosphate kinase OS=Beijerinckia indi... [more]
NDK_YERPB8.836e-2045.28Nucleoside diphosphate kinase OS=Yersinia pseudotu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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