EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_RHOS5 (Nucleoside diphosphate kinase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD  +R L  +I ++FE  G ++VA K +  S   AQK Y   K+RPFF  L EF++S PV+  V EGEG I   R+++GAT+P  ++ GTIR + A+ VG  S     AP  A
Sbjct:    3 IERTLSIIKPDATRRNLTGKINAKFEDAGLRIVAQKRIHLSLAQAQKFYGVHKDRPFFGELTEFMASEPVVVQVLEGEGAIAKNREVMGATNPANADEGTIRKEFALSVGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            ++RTF  IKPD V + +I +I +RFE  G K+VA KI   SK  A+  Y +   R FF  L  F++SGPV+  V EGE  I   R+L+GAT+P+ + PGTIR D A
Sbjct:    3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_POLNA (Nucleoside diphosphate kinase OS=Polaromonas naphthalenivorans (strain CJ2) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD V + +I +I +RFE  G K+VA K+   S+  A+  Y   KERPFF  L  F+ SGPV+    EGEG +   R L+GATDP++++ GTIR D A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKVVAAKMTHLSQGEAEAFYAVHKERPFFKDLVSFMISGPVMIQALEGEGAVLKNRDLMGATDPKKADAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_JANSC (Nucleoside diphosphate kinase OS=Jannaschia sp. (strain CCS1) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 51/123 (41.46%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            ++RTF  IKPD  +R L  +I ++FE  G ++VA K +  +   AQ  Y    ERPFF  LCEF+ S P++  V EGE  I   R+++GAT+P  + PGTIR + A+ +G  S     AP  A
Sbjct:    3 IQRTFSIIKPDATKRNLTGQIAAKFEEAGLRIVASKRIQLTLAQAQAFYGVHSERPFFGELCEFMISEPIVVQVLEGEDAIVKNREVMGATNPADAAPGTIRKEFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BURXL (Nucleoside diphosphate kinase OS=Burkholderia xenovorans (strain LB400) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I +RFE  G K+VA ++V  S+  A+K Y     RPFF  L +F+ SGPV+    EGE  I   R L+GATDP+++E GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYTRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BRUME (Nucleoside diphosphate kinase OS=Brucella melitensis GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERTF  IKPD  +R L   II++ E  G ++VA K V  S+  A+  Y   K+RPFF  L EF+SSGP +  V EGE  I   R+++GAT+P  ++ GTIR   A+ +G  S     AP  A
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKAFALSIGENSVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIF5 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD VQ+  I  I+ RFE+ G ++ A K++  S++ A   Y   + RPF+  LC+F+SSGPV+  V EGEG I   R L+GAT+P+ +  GTIR D A
Sbjct:    3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ACIF2 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERT   IKPD VQ+  I  I+ RFE+ G ++ A K++  S++ A   Y   + RPF+  LC+F+SSGPV+  V EGEG I   R L+GAT+P+ +  GTIR D A
Sbjct:    3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_POLSQ (Nucleoside diphosphate kinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19
Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD V + +I +I  RFE  G K++A ++   S+  A++ Y   K+RPFF  L  F+ SGPV+  V +GEG I   R L+GATDP++++ GTIR D A  +   +     AP  A
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYDRFESAGLKIIASRMAHLSQNEAEQFYGVHKDRPFFKDLVSFMISGPVMIQVLQGEGAIAKNRDLMGATDPKKADKGTIRADFADSIDANAVHGSDAPETA 125          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_NEIMF (Nucleoside diphosphate kinase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=ndk PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERT   IKPD V + +I +I SRFE  G K+VA K+   + + AQ+ Y   K+RPF+ GL EF++ GPV+  V EGE  +   R+L+GAT+P  +  GTIR D A  V
Sbjct:    3 IERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGTIRADFATSV 111          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_RHOS58.836e-2043.90Nucleoside diphosphate kinase OS=Rhodobacter sphae... [more]
NDK_PSEE48.836e-2047.17Nucleoside diphosphate kinase OS=Pseudomonas entom... [more]
NDK_POLNA8.836e-2047.17Nucleoside diphosphate kinase OS=Polaromonas napht... [more]
NDK_JANSC8.836e-2041.46Nucleoside diphosphate kinase OS=Jannaschia sp. (s... [more]
NDK_BURXL8.836e-2043.09Nucleoside diphosphate kinase OS=Burkholderia xeno... [more]
NDK_BRUME8.836e-2043.09Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_ACIF58.836e-2046.23Nucleoside diphosphate kinase OS=Acidithiobacillus... [more]
NDK_ACIF28.836e-2046.23Nucleoside diphosphate kinase OS=Acidithiobacillus... [more]
NDK_POLSQ1.154e-1941.46Nucleoside diphosphate kinase OS=Polynucleobacter ... [more]
NDK_NEIMF1.154e-1945.87Nucleoside diphosphate kinase OS=Neisseria meningi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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