EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_HAEIG (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittGG) GN=ndk PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.773e-19
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAV 661
            ERTF  IKPD V+R LI  I++RFE+ GFK++A K+V  ++E A+  Y + + + FF  L E++ S P++  V E E  +   R LIG T+P+ +E GTIR D A+
Sbjct:    3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETAEEGTIRKDFAL 108          

HSP 2 Score: 22.3274 bits (46), Expect = 1.773e-19
Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 1
Query:  679 IHGSDGPETRKDEITLWFT 735
            +HGSD  E    EI  +FT
Sbjct:  115 VHGSDSIENANREIAYFFT 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_HAEIE (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittEE) GN=ndk PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.773e-19
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAV 661
            ERTF  IKPD V+R LI  I++RFE+ GFK++A K+V  ++E A+  Y + + + FF  L E++ S P++  V E E  +   R LIG T+P+ +E GTIR D A+
Sbjct:    3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETAEEGTIRKDFAL 108          

HSP 2 Score: 22.3274 bits (46), Expect = 1.773e-19
Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 1
Query:  679 IHGSDGPETRKDEITLWFT 735
            +HGSD  E    EI  +FT
Sbjct:  115 VHGSDSIENANREIAYFFT 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_VIBVY (Nucleoside diphosphate kinase OS=Vibrio vulnificus (strain YJ016) GN=ndk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.773e-19
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRES 679
            +ERTF  IKPD V+R LI EI  R E+ G +++A K+V  + E A   Y + + + FF  L EF++SGP++  V EGE  I   R+L+G T+P+ +  GTIR D A+ +   S
Sbjct:    3 LERTFSIIKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPALKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYALSMRHNS 115          

HSP 2 Score: 22.7126 bits (47), Expect = 1.773e-19
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  679 IHGSDGPETRKDEITLWFTPET 744
            +HGSD P +   EI  +F PE+
Sbjct:  116 VHGSDSPASAAREIAFFF-PES 136          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_VIBVU (Nucleoside diphosphate kinase OS=Vibrio vulnificus GN=ndk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.773e-19
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRES 679
            +ERTF  IKPD V+R LI EI  R E+ G +++A K+V  + E A   Y + + + FF  L EF++SGP++  V EGE  I   R+L+G T+P+ +  GTIR D A+ +   S
Sbjct:    3 LERTFSIIKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPALKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYALSMRHNS 115          

HSP 2 Score: 22.7126 bits (47), Expect = 1.773e-19
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  679 IHGSDGPETRKDEITLWFTPET 744
            +HGSD P +   EI  +F PE+
Sbjct:  116 VHGSDSPASAAREIAFFF-PES 136          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SHEDO (Nucleoside diphosphate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            +ERTF  IKPD V +  I  I +RFE  G K++A K+V  +KE A+  Y +   RPFF  L  F++SGPV+  V EGE  +   R+++GAT+P  +  GT+RGD A  +
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFESAGLKIIASKMVHLTKEQAEGFYAEHSARPFFGALVSFMTSGPVMVQVLEGENAVLANREIMGATNPAEAARGTLRGDYAASI 111          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SERP5 (Nucleoside diphosphate kinase OS=Serratia proteamaculans (strain 568) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKP+ V    I  I +RFER GFK++A K++  ++E A+  Y + K RPFF+GL EF++SGP++  V E E  +   R ++GAT+P  +  GT+R D A
Sbjct:    3 VERTFSIIKPNAVANNDIGAIYARFERAGFKIIASKMLRLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEAENAVQRNRDIMGATNPDNALAGTLRADYA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_LAWIP (Nucleoside diphosphate kinase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 45/107 (42.06%), Postives = 72/107 (67.29%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAV 661
            M+ TF  IKPD VQR LI  II+  E+  F + A+K++  +++ A+  Y   +ERPFFN L +++ SGP+++++  GE  +T  R+L+GAT+PQ ++ GTIR   A+
Sbjct:    1 MQHTFALIKPDAVQRNLIGAIINMIEKNDFYISAMKMLQMNRQQAEGFYSVHRERPFFNELVDYMISGPIVSLILTGENAVTRYRELMGATNPQNAQEGTIRKSFAI 107          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_KLEP7 (Nucleoside diphosphate kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKP+ V + +I  I SRFE  GFK+V  K++  + E A+  Y + + RPFF+GL EF++SGP++  V EGE  +   R L+GAT+P  +  GT+R D A
Sbjct:    3 IERTFSIIKPNAVAKNVIGSIFSRFEAAGFKIVGTKMLHLTVEQARGFYAEHEGRPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_KLEP3 (Nucleoside diphosphate kinase OS=Klebsiella pneumoniae (strain 342) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            +ERTF  IKP+ V + +I  I SRFE  GFK+V  K++  + E A+  Y + + RPFF+GL EF++SGP++  V EGE  +   R L+GAT+P  +  GT+R D A
Sbjct:    3 IERTFSIIKPNAVAKNVIGSIFSRFEAAGFKIVGTKMLHLTVEQARGFYAEHEGRPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYA 108          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_DINSH (Nucleoside diphosphate kinase OS=Dinoroseobacter shibae (strain DFL 12) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA 709
            +ERT   IKPD  +R L  +I ++FE  G ++VA K +  +K  A   Y    ERPF++ LCEF++S PV+  V EGEG I   R+++GAT+P  + PGTIR + A  VG  S     AP  A
Sbjct:    3 IERTLSIIKPDATKRNLTGKINAKFEDAGLRIVAQKRIHLTKAQAGVFYAVHAERPFYDELCEFMASEPVVVQVLEGEGAIAKNREVMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETA 125          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_HAEIG1.773e-1944.34Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_HAEIE1.773e-1944.34Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_VIBVY1.773e-1942.48Nucleoside diphosphate kinase OS=Vibrio vulnificus... [more]
NDK_VIBVU1.773e-1942.48Nucleoside diphosphate kinase OS=Vibrio vulnificus... [more]
NDK_SHEDO1.968e-1944.04Nucleoside diphosphate kinase OS=Shewanella denitr... [more]
NDK_SERP51.968e-1944.34Nucleoside diphosphate kinase OS=Serratia proteama... [more]
NDK_LAWIP1.968e-1942.06Nucleoside diphosphate kinase OS=Lawsonia intracel... [more]
NDK_KLEP71.968e-1945.28Nucleoside diphosphate kinase OS=Klebsiella pneumo... [more]
NDK_KLEP31.968e-1945.28Nucleoside diphosphate kinase OS=Klebsiella pneumo... [more]
NDK_DINSH1.968e-1943.09Nucleoside diphosphate kinase OS=Dinoroseobacter s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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