EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.508e-36
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERTFIAIKPDGVQRGL+ EI+ RFER+GFKLV +K++  S+  AQKHY + KERPFF GL  F++S PV+A+V EG+GV+   R ++G T+P  S  GTIRGD  + +GR
Sbjct:    1 MERTFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALAQKHYAEHKERPFFGGLVAFITSSPVVAVVLEGKGVVATARAMMGVTNPLNSPLGTIRGDYGIDIGR 111          

HSP 2 Score: 32.3426 bits (72), Expect = 1.508e-36
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTP 738
            + IIHGSD  E+ + EI LWF P
Sbjct:  111 RNIIHGSDSLESAEREIALWFAP 133          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36
Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPAR 712
            MERTF+AIKPDGVQRGL+ EII RFE KGF LV +K +  SKE A++HY   +ERPFF  L EF++S PV+AMVWEG+GV+   RK+IGAT+P  SEPGTIRGD  + +GR       AP  A+
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTSEPGTIRGDFGINIGRNLIHGSDAPETAQ 124          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_HUMAN (Nucleoside diphosphate kinase B OS=Homo sapiens GN=NME2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36
Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A +ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K +  S+E  ++HY DLK+RPFF GL ++++SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       + + A         P  L  Y   A  WVYE
Sbjct:    2 ANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAHDWVYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.965e-36
Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            MER+F+ +KPDGVQRGLI E+ISR ER+G KLVA K++  S+E A++HY  LK++PFF  L EF++SGPV+AMVWEG   I+  RK +GAT+P  +EPGTIR D A
Sbjct:    1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANAEPGTIRADFA 106          

HSP 2 Score: 34.2686 bits (77), Expect = 1.965e-36
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  655 SCCCWKRIIHGSDGPETRKDEITLWF 732
            +C     ++HGSDGPE+ + EI LWF
Sbjct:  106 ACDVSYNVVHGSDGPESAEREIRLWF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 3.327e-36
Identity = 65/110 (59.09%), Postives = 88/110 (80.00%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTF+A+KPDGVQR L+ EI+ RFERKGFKLVA+K+V  S+E  ++HY +L+E+PF++ L +++SSGPV+AMVW+G  V+   R LIGATDP  + PGTIRGD  + VG+
Sbjct:   22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGK 131          

HSP 2 Score: 30.0314 bits (66), Expect = 3.327e-36
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            K +IHGSD  E+   EI LWF
Sbjct:  131 KNVIHGSDSVESAHREIALWF 151          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CHICK (Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 2
Query:  332 AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            AA  ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K V  S++  ++HY DLK+RPF+ GL ++++SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       +   A+        P  L  Y   A  WVYE
Sbjct:    2 AANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHASEDLLKQHYIDLKDRPFYPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAQKEISLWFKPAELIDYRSCAHDWVYE 153          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKA_RAT (Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A  ERTFIAIKPDGVQRGL+ EII RFE+KGF+LV +K +  S++  ++HY DLK+RPFF+GL +++ SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       +   A         P  L  Y   A+ W+YE
Sbjct:    2 ANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEISLWFQPEELVDYKSCAQNWIYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKA_MOUSE (Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A  ERTFIAIKPDGVQRGL+ EII RFE+KGF+LV +K +  S++  ++HY DLK+RPFF GL +++ SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       + + A         P  L  Y   A+ W+YE
Sbjct:    2 ANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFQPEELVEYKSCAQNWIYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.156e-36
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A +ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K +  S+E  ++HY DLK+RPFF GL ++++SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       +   A         P  L  Y   A  WVYE
Sbjct:    2 ANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFKPEELIDYKSCAHDWVYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_BOVIN (Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.156e-36
Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A  ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K +  S+E  ++HY DLK+RPFF GL ++++SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       + + A    +    P  L  Y   A  W+YE
Sbjct:    2 AHAERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEINLWFKPEELIEYKPCAFDWIYE 152          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_GLOVI1.508e-3659.46Nucleoside diphosphate kinase OS=Gloeobacter viola... [more]
NDK_NOSP71.772e-3659.68Nucleoside diphosphate kinase OS=Nostoc punctiform... [more]
NDKB_HUMAN1.772e-3652.32Nucleoside diphosphate kinase B OS=Homo sapiens GN... [more]
NDK_SYMTH1.965e-3660.38Nucleoside diphosphate kinase OS=Symbiobacterium t... [more]
NDK3_MOUSE3.327e-3659.09Nucleoside diphosphate kinase 3 OS=Mus musculus GN... [more]
NDK_CHICK3.948e-3651.97Nucleoside diphosphate kinase OS=Gallus gallus PE=... [more]
NDKA_RAT3.948e-3650.33Nucleoside diphosphate kinase A OS=Rattus norvegic... [more]
NDKA_MOUSE3.948e-3650.33Nucleoside diphosphate kinase A OS=Mus musculus GN... [more]
NDKB_RAT5.156e-3652.32Nucleoside diphosphate kinase B OS=Rattus norvegic... [more]
NDKB_BOVIN5.156e-3651.66Nucleoside diphosphate kinase B OS=Bos taurus GN=N... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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