EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.110e-35
Identity = 63/110 (57.27%), Postives = 87/110 (79.09%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ERTFIAIKPDGVQRGLIS+I+SRFE +G+KLV IK+V P++   ++HY +  E+PFF  +  +++SGP++A VWEG+ V+  GR ++GAT+P  S PGTIRGD A+ +GR
Sbjct:    4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGR 113          

HSP 2 Score: 28.4906 bits (62), Expect = 6.110e-35
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + + HGSD  E+ + EI LWF  E
Sbjct:  113 RNVCHGSDSVESAQREIDLWFKKE 136          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKA_DROYA (Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35
Identity = 76/148 (51.35%), Postives = 97/148 (65.54%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMR-SHCGSHPRLG*YTXHAEKWVYE 784
            ERTFI +KPDGVQRGL+ +II RFE+KGFKLVA+K    SKE  +KHY DL  RPFF GL  +++SGPV+ MVWEG  V+  GR+++GAT+P  S PGTIRGD  + VGR       A   A    +   +   L  +T  A+ W+YE
Sbjct:    3 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 150          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.962e-35
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TF+ +KPDGVQR LI EI+ RFE KG+KL   K++  S + A+ HY + KERPFF  L +F++SGPV AMVWEGE VI   RK++G T+P  ++P TIRGD  + VG+
Sbjct:    1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGK 111          

HSP 2 Score: 31.5722 bits (70), Expect = 7.962e-35
Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFT 735
            K IIHGSD  E+ + EITL+FT
Sbjct:  111 KNIIHGSDSAESAEREITLFFT 132          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.724e-35
Identity = 75/149 (50.34%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMR-SHCGSHPRLG*YTXHAEKWVYE 784
            MERTF+ +KPDGVQRGL+ ++I RFE KGFKLV +K+V  S+E A++HY   +ERPFF  L EF+ S PV+AMVWEG+G I   RK+IGAT+P  +EPGTIRGD  V +GR        P  A    +   S   L  +    + W+YE
Sbjct:    1 MERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.724e-35
Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPA-RMRSHCGSHPRLG*YTXHAEKWV 778
            MERT++ +KPDGVQR LI  I+SRFE+KG+ L A K+V  SKE A+ HY + +ERPFF  L  F++SGPV AMVWEGEGVI   R+LIGAT+P  + PGTIRGDLAV VG        +P  A R  +       L  Y   + KWV
Sbjct:    1 MERTYVMVKPDGVQRNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGMNVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.270e-34
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPR-PARMRSHCGSHPRLG*YTXHAEKWVYE 784
            MERTFI +KPDGVQRGL+ EIISRFE++GFKLV +K++  S+E A+ HY + K +PFF GL  F++SGPV+AMVWEG+ VI   R+++GAT+P +++PGTIRG   + VGR       +P   AR  +       L  Y    + W+YE
Sbjct:    1 MERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVGRNVIHGSDSPESAAREIALFFKEEELLSYEKTLDTWIYE 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDKB_CANFA (Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.270e-34
Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            A  ERTFIAIKPDGVQRGL+ +I+ RFE+KGF+LVA+K +  S++  ++HY DLK+RPF+ GL +++ SGPV+AMVWEG  V+  GR ++G T+P  S+PGTIRGD  + VGR       + + A         P  L  Y   A  W+YE
Sbjct:    2 AHQERTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPGLVKYMHSGPVVAMVWEGLNVVKTGRMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.984e-34
Identity = 62/111 (55.86%), Postives = 88/111 (79.28%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERT++ IKPDGVQRGL+ EIISRFE+KGFKLV +K +  ++E A+KHY +   +PFF GL +++ SGPV+AM WEG+ +++  R+++GAT+P ++ PGTIRG  AV +GR
Sbjct:    1 MERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPVVAMCWEGKDIVSVSREMMGATNPAKAAPGTIRGTYAVDIGR 111          

HSP 2 Score: 26.1794 bits (56), Expect = 2.984e-34
Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + IIHGSD P + + E+ ++F
Sbjct:  111 RNIIHGSDSPASAERELAIYF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_GEOKA (Nucleoside diphosphate kinase OS=Geobacillus kaustophilus GN=ndk PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.695e-34
Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  344 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMR-SHCGSHPRLG*YTXHAEKWVY 781
            ERTFI +KPDGVQR LI EI++RFE+KGF+LV  K++  S+E A++HY + KERPFF  L +F++SGPV AMVWEGE VI   R+++G T+PQ + PGTIRGD  + VG+       +P+ A+   S       L  Y+     W+Y
Sbjct:    3 ERTFIMVKPDGVQRNLIGEIVARFEKKGFQLVGAKLMQVSRELAEQHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIAAARQMMGKTNPQEAAPGTIRGDFGLTVGKNVIHGSDSPQSAKREISLFFKEEELVSYSKQINAWLY 149          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 5.061e-34
Identity = 61/114 (53.51%), Postives = 87/114 (76.32%), Query Frame = 2
Query:  332 AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            +++ ERTFIA+KPDGVQRGL+S+I+SRFE+KG+KLVAIK+V    +  ++HY +   +PFF  +  F+ SGP++A VWEG+ V+  GR ++GAT+P  S PGTIRGD  + +GR
Sbjct:    2 SSQTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGR 115          

HSP 2 Score: 27.7202 bits (60), Expect = 5.061e-34
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + + HGSD  ++ + EI LWF  E
Sbjct:  115 RNVCHGSDSVDSAEREINLWFKKE 138          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ASHGO6.110e-3557.27Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDKA_DROYA7.445e-3551.35Nucleoside diphosphate kinase (Fragment) OS=Drosop... [more]
NDK_OCEIH7.962e-3554.95Nucleoside diphosphate kinase OS=Oceanobacillus ih... [more]
NDK_SYNP29.724e-3550.34Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_BACSK9.724e-3553.06Nucleoside diphosphate kinase OS=Bacillus clausii ... [more]
NDK_CARHZ1.270e-3449.66Nucleoside diphosphate kinase OS=Carboxydothermus ... [more]
NDKB_CANFA1.270e-3449.01Nucleoside diphosphate kinase B OS=Canis familiari... [more]
NDK_HELMI2.984e-3455.86Nucleoside diphosphate kinase OS=Heliobacterium mo... [more]
NDK_GEOKA3.695e-3448.98Nucleoside diphosphate kinase OS=Geobacillus kaust... [more]
NDK_YEAST5.061e-3453.51Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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