EY695515

Overview
NameEY695515
Unique NameEY695515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY695515_ssr57 microsatellite EY695515_ssr57:57..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_NEUCR (Nucleoside diphosphate kinase OS=Neurospora crassa GN=ndk-1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 6.303e-34
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 2
Query:  335 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPARMRSHCGSHP-RLG*YTXHAEKWVYE 784
            +  E+TFIA+KPDGVQRGL+  IISRFE +GFKLVA+K+  P +   +KHY DL  +PFF GL ++++SGP+ AMVWEG+  +  GR ++GAT+P  S PGTIRGD A+ +GR       +   A+        P  L  +  H+  W++E
Sbjct:    2 SNQEQTFIAVKPDGVQRGLVGNIISRFENRGFKLVAMKLTQPGQAHLEKHYEDLNTKPFFAGLIKYMNSGPICAMVWEGKDAVKTGRTILGATNPLASAPGTIRGDFALDMGRNVCHGSDSVENAKKEIALWFKPEELNQWNHHSAAWIFE 152          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.121e-33
Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            MERTF+ IKPDGV+RGL+ EI++RFERKGF++ A+K++  S+E A++HY + +E+PFF GL  F++SGPV+AMV EG GV+   RK++GAT P+ + PGTIRGD A  +
Sbjct:    1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTI 109          

HSP 2 Score: 25.0238 bits (53), Expect = 1.121e-33
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPETWL 750
            + +IHGS   E  + EI L+F PE  L
Sbjct:  111 ENVIHGSATLEDAQREIALFFRPEELL 137          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.460e-33
Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVV 667
            MERTF+ IKPDGV+RGL+ EI++RFERKGF++ A+K++  S+E A++HY + +E+PFF GL  F++SGPV+AMV EG GV+   RK++GAT P+ + PGTIRGD A  +
Sbjct:    1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTI 109          

HSP 2 Score: 25.0238 bits (53), Expect = 1.460e-33
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPETWL 750
            + +IHGS   E  + EI L+F PE  L
Sbjct:  111 ENVIHGSATLEDAQREIALFFRPEELL 137          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.395e-33
Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGRESFMEVMAPRPAR 712
            MERT++ IKPDGVQR LI EI+SRFE+KGF L+  K++  +KE A+ HY + KERPFF  L +F++SGPV AMVWEGE VI   RK++GAT+P  +EPGTIRGD  V V         +P  A+
Sbjct:    1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAK 124          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.476e-33
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLA 658
            ME+TF+ +KPDGV+RGLI EIISRFE KG+ L  +++V PS E A+ HY + KE+PFF  L EFL+SGPV+AM WEGE ++   R +IG T P  ++PGTIRGD A
Sbjct:    1 MEKTFLMVKPDGVKRGLIGEIISRFENKGYTLNRLEMVTPSVEVAEAHYAEHKEKPFFGELVEFLTSGPVVAMEWEGEDIVAVSRLMIGKTKPVDAQPGTIRGDFA 106          

HSP 2 Score: 27.7202 bits (60), Expect = 2.476e-33
Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            + +IHGSD  ++ + E++LWF
Sbjct:  111 QNVIHGSDSVDSAERELSLWF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.461e-33
Identity = 61/111 (54.95%), Postives = 89/111 (80.18%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            MERT++ +KPDGVQRGLI +IIS+FE+KG+K+V +K++  S+E A++HY +   +PFFNGL +F++SGPV+AMV EG+ V+T  R+++GAT+P ++ PGTIR    V VGR
Sbjct:    1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGR 111          

HSP 2 Score: 25.409 bits (54), Expect = 5.461e-33
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            + IIHGSD  E+ + EI ++F  E
Sbjct:  111 RNIIHGSDSLESAQREIGIFFKSE 134          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BACCR (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ndk PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.268e-33
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TF+ +KPDGVQR  I EI++RFE+KGF+LV  K++  + E A +HY + KE+PFF  L +F++SGPV AMVW+GEGV+   R ++G T P  + PGTIRGD  V V +
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHKEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAK 111          

HSP 2 Score: 27.335 bits (59), Expect = 9.268e-33
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            K IIHGSD  E+ + EI ++F  E
Sbjct:  111 KNIIHGSDSLESAEREIAIFFKEE 134          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BACSU (Nucleoside diphosphate kinase OS=Bacillus subtilis GN=ndk PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 1.206e-32
Identity = 62/111 (55.86%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TFI +KPDGVQR LI +I+SRFERKG +L   K++  +++ A+KHY + + +PFF  L EF++SGPV AMVWEGE VI   R+LIG T+P+ + PGTIRGD  + VG+
Sbjct:    2 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYAEHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGTIRGDYGMFVGK 112          

HSP 2 Score: 26.9498 bits (58), Expect = 1.206e-32
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            K IIHGSD  E+ + EI ++F  E
Sbjct:  112 KNIIHGSDSLESAEREINIFFKNE 135          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.207e-32
Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TF+ +KPDGVQR LI EI+ RFERKG +L+  K++  S+E A +HY +   +PFF  L +F++SGPV AMVWEGE  I   R+LIG T+P+ + PGTIRGD  + VG+
Sbjct:    1 MEKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGK 111          

HSP 2 Score: 30.0314 bits (66), Expect = 1.207e-32
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWF 732
            K IIHGSD PE+   EI L+F
Sbjct:  111 KNIIHGSDSPESAAREINLFF 131          
BLAST of EY695515 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.572e-32
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  341 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQRSEPGTIRGDLAVVVGR 673
            ME+TF+ IKPDGV RGLI EI+ R E KG K+V  K++  S++ A+ HY +  E+PFF  L EF++SGPV AMV EG+ V+  GR L+G T+P  S PGTIRGD  + VG+
Sbjct:    1 MEKTFLMIKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGPVFAMVLEGDNVVEIGRTLVGKTNPAESAPGTIRGDFGMTVGK 111          

HSP 2 Score: 29.6462 bits (65), Expect = 1.572e-32
Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  670 KRIIHGSDGPETRKDEITLWFTPE 741
            K IIHGSD   +   EI LWF  E
Sbjct:  111 KNIIHGSDSVASADKEIALWFKEE 134          
The following BLAST results are available for this feature:
BLAST of EY695515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_NEUCR6.303e-3446.36Nucleoside diphosphate kinase OS=Neurospora crassa... [more]
NDK_THET81.121e-3356.88Nucleoside diphosphate kinase OS=Thermus thermophi... [more]
NDK_THET21.460e-3356.88Nucleoside diphosphate kinase OS=Thermus thermophi... [more]
NDK_BACHD2.395e-3355.65Nucleoside diphosphate kinase OS=Bacillus halodura... [more]
NDK_EXISA2.476e-3358.49Nucleoside diphosphate kinase OS=Exiguobacterium s... [more]
NDK_DESRM5.461e-3354.95Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_BACCR9.268e-3353.15Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACSU1.206e-3255.86Nucleoside diphosphate kinase OS=Bacillus subtilis... [more]
NDK_BACLD1.207e-3254.05Nucleoside diphosphate kinase OS=Bacillus lichenif... [more]
NDK_MACCJ1.572e-3254.05Nucleoside diphosphate kinase OS=Macrococcus caseo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695515 ID=EY695515; Name=EY695515; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGGGCTTACTTACTCTCTTGTTTCAGCTTAAATTTGAGT
CTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGATCT
GCTTCTAGAGCCGCAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTC
GCGCTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACAT
TCAGTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCC
TCAACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCA
CTTTCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAA
ATCATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGAT
AGTAGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGG
AAAGACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTC
ATTGCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACT
CATTGGAGCCACAGATCCTCAGAGATCAGAACCTGGAACAATCAGAGGCG
ATCTAGCTGTTGTTGTTGGAAGAGAATCATTCATGGAAGTGATGGCCCCG
AGACCCGCAAGGATGAGATCACATTGTGGTTCACACCCGAGACTTGGTTA
ATACACAAGNCATGCAGAGAAGTGGGTCTATGAATCCACTGAGTACAATT
TTCTCTTACGTTTATAGAAACTTAGGNGCTACATGATAGTGCGATTAGAG
CATAACTGGTCCAAAAAATTTTGTTCTGTGAGATGAGTAAACACAACTTG
CTC
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