EY693224

Overview
NameEY693224
Unique NameEY693224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_SHIF8 (Taurine import ATP-binding protein tauB OS=Shigella flexneri serotype 5b (strain 8401) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_SHIDS (Taurine import ATP-binding protein tauB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_SHIBS (Taurine import ATP-binding protein tauB OS=Shigella boydii serotype 4 (strain Sb227) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_ECOUT (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain UTI89 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_ECOLI (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain K12) GN=tauB PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL6 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6 GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL5 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2 
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_CHRVO (Taurine import ATP-binding protein tauB OS=Chromobacterium violaceum GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 49/114 (42.98%), Postives = 61/114 (53.51%), Query Frame = -2 
Query:    1 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEERRNR 336
            A L A  + + Y G +   L+G  L + PGE+   LGPSG GK++LL + AG Q P  GS+   G P+ GP    AV FQ  +LLPWLS   NVAFGL     P     E   R
Sbjct:    2 AALTADRVSVRYPGQAQPALDGVSLNVGPGELAVALGPSGCGKTTLLNLFAGFQFPDSGSVRFGGVPVAGPGAERAVVFQQHALLPWLSALDNVAFGLRLRGVPRAERRELAGR 115
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB1_RHIL3 (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.142e-16
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = -2 
Query:   49 AVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 381
            A A    P+    + A +   G+   +GGN VL G +L +  G+ V+++G SG GKS+LLR+L GL  P  G +H          P   + FQ+P LLPWLS+  NV  GL
Sbjct:   17 AYARENAPAVSRSAPAAISLTGLEKSFGGNRVLRGINLHIPAGQFVAVIGKSGCGKSTLLRILMGLDEPSAGELHFEDADGAQASPNARIVFQEPRLLPWLSVADNVVVGL 127
[Close]
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_PSEPU (Taurine import ATP-binding protein tauB OS=Pseudomonas putida GN=tauB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.491e-16
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = -2 
Query:   10 AVLHAQGICLGYGG--NSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEER 336
            A+L  + I   Y G    VL   +L L P +++  LGPSG GK+SLL ++AG  AP GG I L G P+ GP     V FQD +LLPW ++  NVAFGL+ A  P    E +
Sbjct:    2 ALLELERISAQYPGAETPVLADINLSLGPRQLLVALGPSGSGKTSLLNLIAGFVAPSGGRITLDGVPVQGPGAERGVVFQDDALLPWQNVLGNVAFGLELAGVPRAEREAK 112
The following BLAST results are available for this feature:
BLAST of EY693224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
TAUB_SHIF88.741e-1747.73Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIDS8.741e-1747.73Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIBS8.741e-1747.73Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_ECOUT8.741e-1747.73Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOLI8.741e-1747.73Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOL68.741e-1747.73Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOL58.741e-1747.73Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_CHRVO8.741e-1742.98Taurine import ATP-binding protein tauB OS=Chromob... [more]
SSUB1_RHIL31.142e-1638.74Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEPU1.491e-1644.14Taurine import ATP-binding protein tauB OS=Pseudom... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693224 ID=EY693224; Name=EY693224; organism=Citrus sinensis; type=EST; length=562bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGGTTGGCGGGCAAAGTCCA
GGCCGAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCTGCAAACCGGCAAGCACCC
GCAGCAGGCTGGACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAAGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCAGGTAGGCCTTGCCACCGCTGGCTTGCAGCTCCAGTTGGACGGC
GCTGGCGGCAATTTCCGCGAGAGCAATGCGCAGGCGGAACAACGGTACCG
GCTCGGTCCCGA
back to top