EY693224

Overview
NameEY693224
Unique NameEY693224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: Y3108_BRUME (Putative ATP-binding protein BMEII0108 OS=Brucella melitensis GN=BMEII0108 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = -2
Query:   40 ICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL-DFA 315
            + + YGG   L+  +L +  GE V+++GPSG GKS+ + +  GL  P GG I +  +P+ GP P   V FQ  +L PWL++ +NV FGL DFA
Sbjct:   10 VVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIADGLLQPSGGGILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLTDFA 102          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB2_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Xanthomonas axonopodis pv. citri GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = -2
Query:   49 AHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 375
            A R  P   + +   L  +GI   YG + VL G DL++ P   V+I+G SG GKS+LLRV+AGL+    G++     PL      V + FQD  LLPW  +  NVA GL
Sbjct:   11 ACRATPMSAATTGLPLRVRGIAKRYGDSDVLRGIDLEIAPSACVAIVGRSGCGKSTLLRVIAGLETADVGTVDSGRAPLAAQRDAVRLMFQDARLLPWKRVIDNVALGL 119          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: NRTD_SYNE7 (Nitrate transport ATP-binding protein nrtD OS=Synechococcus elongatus (strain PCC 7942) GN=nrtD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = -2
Query:    7 LEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEERR 285
            +E  +L +Q GE + ++G SG GKS+LL +++G   P  G ++L G+P+  P P   V FQ+ SLLPW S   N+A  +  AR PHLS  E+R
Sbjct:   36 IEDVNLSVQQGEFICVIGHSGCGKSTLLNLVSGFSQPTSGGVYLDGQPIQEPGPDRMVVFQNYSLLPWKSARDNIALAVKAAR-PHLSTSEQR 127          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB_RALEH (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ssuB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = -2
Query:   34 EPSGQSMSQA---VLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPL---NGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQ 363
            +P+ ++  +A    LH + +   Y G  VL    L + PGE ++I+G SG GKS+LLR++AGL+A  GGSI + GE        H  V V FQD  LLPW  +  NVA GL   R+
Sbjct:   25 QPAAEAPRKAGGVALHVRQVVKRYDGREVLHNVALDVAPGEFLAIVGRSGCGKSTLLRLVAGLEAADGGSITVDGESAAKGRARHADVRVMFQDARLLPWKRVLDNVALGLPRTRR 140          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB2_PSESM (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Pseudomonas syringae pv. tomato GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -2
Query:   46 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 303
            + G++VL   +L LQ GE+VS+LGPSG GKS+LLR++AGL+    GS+    E + G   +VA  FQ+P L+PWL++E+N+ F  D
Sbjct:   10 FAGHTVLHDINLSLQTGEIVSLLGPSGCGKSTLLRIVAGLEQDFRGSV----ERIQG---QVAFVFQEPRLMPWLTVEQNIGFSDD 88          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: POTA_METCA (Spermidine/putrescine import ATP-binding protein potA OS=Methylococcus capsulatus GN=potA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = -2
Query:    1 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHP---RVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEERRNR 303
            YG +  L  F+L+L+ GE++++LGPSG GK+++LR+LAGL+ P  G I L G  L G  P    V   FQ  +L P LS+ +NVAFGL   R   L   E R R
Sbjct:   36 YGSHCALRDFNLELREGELLTLLGPSGCGKTTVLRLLAGLEIPDSGEIFLDGRTLAGVPPEARNVNTVFQSYALFPHLSVAENVAFGL---RMKKLGSAEIRAR 136          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_PSE14 (Taurine import ATP-binding protein tauB OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tauB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = -2
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEER 336
            A+L  + I   Y G +  VL   +L L P +++  LGPSG GK+SLL ++AG   P  G I L G P+ GP     V FQD +LLPW ++  NVAFGL+ A    L  E R
Sbjct:    2 ALLQLERIGAQYPGAAAPVLADINLSLGPQQLLVALGPSGSGKTSLLNLIAGFIKPGSGRITLDGIPVEGPSAERGVVFQDDALLPWQNVLANVAFGLELAGVGRLERETR 112          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB_RALEJ (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain JMP134) GN=ssuB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = -2
Query:    7 LHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEERR 330
            LH Q +   Y G  VL   +L   PGE V+I+G SG GKS+LLR++AGL+    G+I L  +P       + V FQD  LLPW  + +NVA GL         P ERR
Sbjct:   36 LHVQQVIKRYDGREVLHRIELTAAPGEFVAIVGRSGCGKSTLLRLVAGLECADEGAITLDAQPARTLQQDIRVMFQDSRLLPWKRVLENVALGL---------PRERR 134          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB1_RHILO (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhizobium loti GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = -2
Query:   49 QGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 321
            +G+   +G   VL+G DL +  G+ V+++G SG GKS+LLR+LAGL  P  GS+ L  E     H R    FQ+P LLPW S+ KNV  GL
Sbjct:   34 KGVEKRFGDKIVLDGIDLDVPAGQFVAVIGKSGCGKSTLLRLLAGLDRPTSGSLTLGAE--EEGHSRTRFMFQEPRLLPWASVVKNVEIGL 122          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_PSEF5 (Taurine import ATP-binding protein tauB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tauB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.396e-14
Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = -2
Query:   40 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 336
            A+L  + I   Y G +  VL    L L P +++  LGPSG GK+SLL ++AG   P  G I L G P+ GP     V FQD +LLPW  +  NVAFGL+ A
Sbjct:    2 ALLQLERISAQYPGAAEPVLADISLTLGPQQLLVALGPSGSGKTSLLNLIAGFVEPSAGRIQLDGVPVQGPSAERGVVFQDDALLPWQDVLGNVAFGLELA 102          
The following BLAST results are available for this feature:
BLAST of EY693224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
Y3108_BRUME2.812e-1543.01Putative ATP-binding protein BMEII0108 OS=Brucella... [more]
SSUB2_XANAC2.812e-1541.28Aliphatic sulfonates import ATP-binding protein ss... [more]
NRTD_SYNE73.672e-1543.01Nitrate transport ATP-binding protein nrtD OS=Syne... [more]
SSUB_RALEH4.796e-1541.38Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB2_PSESM4.796e-1547.67Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_METCA8.181e-1545.19Spermidine/putrescine import ATP-binding protein p... [more]
TAUB_PSE141.069e-1443.24Taurine import ATP-binding protein tauB OS=Pseudom... [more]
SSUB_RALEJ1.069e-1442.59Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_RHILO1.069e-1446.15Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEF51.396e-1444.55Taurine import ATP-binding protein tauB OS=Pseudom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693224 ID=EY693224; Name=EY693224; organism=Citrus sinensis; type=EST; length=562bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGGTTGGCGGGCAAAGTCCA
GGCCGAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCTGCAAACCGGCAAGCACCC
GCAGCAGGCTGGACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAAGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCAGGTAGGCCTTGCCACCGCTGGCTTGCAGCTCCAGTTGGACGGC
GCTGGCGGCAATTTCCGCGAGAGCAATGCGCAGGCGGAACAACGGTACCG
GCTCGGTCCCGA
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