EY693222

Overview
NameEY693222
Unique NameEY693222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_COCIM (Pre-rRNA-processing protein PNO1 OS=Coccidioides immitis GN=PNO1 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.795e-64
Identity = 123/198 (62.12%), Postives = 154/198 (77.78%), Query Frame = 1
Query:  136 KPLFEPLKAHEMSDG--RVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +PLF P+ A   +DG  R++ RKV VPPHR SPLK  W +IY P+ E +K+ +RMN+K++ VEL+T  +T D   LQK  DF+ AF LGFDV DAIALLRLD+LYIE+FEIKDVK L GEHL RAIGR++GK GKTKFAIENA++TR+V+AD KIHILG F NI+IAR+++ SLIL SP GKVY  L+ V +R+ ERF
Sbjct:   61 RPLFTPITA---TDGAYRIENRKVPVPPHRMSPLKAAWPKIYPPLVEHLKLQVRMNIKSKAVELRTSKNTTDTGALQKGEDFIKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKPLNGEHLGRAIGRIAGKDGKTKFAIENASRTRVVLADQKIHILGGFRNIRIAREAIVSLILGSPPGKVYGNLRTVASRMKERF 255          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_MOUSE (RNA-binding protein PNO1 OS=Mus musculus GN=Pno1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.068e-63
Identity = 116/207 (56.04%), Postives = 158/207 (76.33%), Query Frame = 1
Query:  103 QLQNESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            ++  E      +P+F PL   ++  G+ + RK+ VP +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T  DT D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD  +HILGSF NIK+AR ++C+LIL +P  KVY  ++AV +R A+RF
Sbjct:   42 RMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPGNRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVHVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF 248          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_HUMAN (RNA-binding protein PNO1 OS=Homo sapiens GN=PNO1 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.380e-63
Identity = 116/207 (56.04%), Postives = 158/207 (76.33%), Query Frame = 1
Query:  103 QLQNESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            ++  E      +P+F PL    +  G+ + RK+ VP +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T  +T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LIL +P  KVY  ++AV +R A+RF
Sbjct:   46 RMDTEEARPAKRPVFPPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF 252          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_BOVIN (RNA-binding protein PNO1 OS=Bos taurus GN=PNO1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 4.059e-63
Identity = 115/206 (55.83%), Postives = 156/206 (75.73%), Query Frame = 1
Query:  106 LQNESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +  E      +P+F PL       G+ + RK+ VP +RY+PLK+ W++I+TPI E + + IR NLK+R VE++T  +T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LIL +P  KVY  ++AV +R A+RF
Sbjct:   47 MDTEEARPAKRPVFPPLSGDGFLSGKEETRKIPVPANRYTPLKENWLKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRAADRF 252          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_DEBHA (Pre-rRNA-processing protein PNO1 OS=Debaryomyces hansenii GN=PNO1 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.015e-62
Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 1
Query:  112 NESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +ESG    KP F       M   +++ RKV VPPHR +PLK  W +IY P+ + +K+ +RMNLK + +E+KT  +T D   LQK ADFV AF LGFDV DAIALLRLD+LYIE+FE+KDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLIL SP GKVY  L+ V +R+ ER+
Sbjct:   57 DESG----KPKFSAASKSGMKV-KLESRKVPVPPHRMTPLKNTWTKIYPPLVDHLKLQVRMNLKTKTIEMKTNKNTVDQGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEVKDVKTLNGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGSPPGKVYGNLRTVASRMKERY 255          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_KLULA (Pre-rRNA-processing protein PNO1 OS=Kluyveromyces lactis GN=PNO1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.656e-62
Identity = 119/197 (60.41%), Postives = 153/197 (77.66%), Query Frame = 1
Query:  136 KPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRAD-TPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            KP F    +   +  +++ RKV+VPPHR +PLK  W +IY P+ + +K+ +RMNLK + VEL+T    T D   LQK ADF+ AF LGFD+ D+IALLRLD+LYIE+FEIKDVKTL+G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+S+ SLIL SP GKVY  L+ V +RL ER+
Sbjct:   78 KPRFTSAASSAQTKVKLESRKVSVPPHRMTPLKNNWSKIYPPLVDHLKLQVRMNLKTKSVELRTHPKHTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEIKDVKTLQGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMARESVVSLILGSPPGKVYGNLRTVASRLKERY 274          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_YARLI (Pre-rRNA-processing protein PNO1 OS=Yarrowia lipolytica GN=PNO1 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.706e-61
Identity = 113/176 (64.20%), Postives = 146/176 (82.95%), Query Frame = 1
Query:  196 KVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            KV +PPHR +PLK  WM+IY P+ EQ+K+ +RMN + +++EL+T ++T D S LQK  DFV AF LGFDV DA+A++RLDELY+E+FEIKDVKTL+G+HL RAIGR++GK GKTKFAIENA++TR+V+ADSKIHILG F NIKIAR+++ SLIL SP GKVY  L+ V +R+ ERF
Sbjct:   83 KVPIPPHRMAPLKNEWMKIYPPLVEQLKLQVRMNPRKKQLELRTCSNTVDNSALQKGTDFVRAFTLGFDVDDAMAIIRLDELYVETFEIKDVKTLQGDHLGRAIGRIAGKDGKTKFAIENASRTRVVLADSKIHILGGFTNIKIAREAIVSLILGSPPGKVYGNLRIVASRMKERF 258          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_DICDI (RNA-binding protein pno1 OS=Dictyostelium discoideum GN=pno1 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.706e-61
Identity = 111/179 (62.01%), Postives = 147/179 (82.12%), Query Frame = 1
Query:  187 QFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            Q RKV +P +R +PLK  W +IY PI   +K+ IRMN K R+VELKT   T + S LQK ADFVHAF LGF+V DA+A+LRLD+LYI+SF+++DVK L+G++LSRAIGR++GK GKTKF IEN TKTRIV+AD +IHILGS++NI++A+D++C LI+ SP GKVY+KL+ V++R+AERF
Sbjct:   61 QIRKVTIPFNRIAPLKANWQQIYEPIVTHLKLQIRMNTKTRKVELKTSKSTKETSALQKAADFVHAFSLGFEVNDAVAILRLDDLYIDSFDVEDVKILKGDNLSRAIGRVAGKDGKTKFTIENVTKTRIVLADKRIHILGSYSNIRVAKDAICDLIIGSPPGKVYAKLRTVSSRIAERF 239          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_CANGA (Pre-rRNA-processing protein PNO1 OS=Candida glabrata GN=PNO1 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.800e-61
Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = 1
Query:  112 NESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRAD-TPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +ESG    KP F   K    +  +++ RKV VPPHR +PL+  W +IY P+ + +K+ +RMNLK R VEL+T    T D   LQK ADF+ AF LGFD+ D+IALLRLD+LYIE+FE+KDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLIL SP GKVY  L+ V +RL ER+
Sbjct:   61 DESG----KPRFGAAKDQATTKVKLESRKVPVPPHRMTPLRNSWNKIYPPLVDHLKLQVRMNLKTRTVELRTHPKHTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGSPPGKVYGNLRTVASRLKERY 261          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_SCHPO (Pre-rRNA-processing protein pno1 OS=Schizosaccharomyces pombe GN=rbp28 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 1.106e-60
Identity = 116/196 (59.18%), Postives = 149/196 (76.02%), Query Frame = 1
Query:  139 PLFEPLK--AHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAER 720
            P F P K  A +    + Q R+V +PPHR +PL+ +W ++Y P+ E + + +RMN K+R VEL+    T D   LQK  DFV AF LGFD+ DAIALLRLD+LYI++FEIKDVKTL+G+HLSRAIGR++G+GGKTKFAIENA++TRIV+ADSKIHILG F NI+IA+D++ SLIL SP GKVY+ L+   AR  ER
Sbjct:   45 PKFAPAKTSAEKKRGAKPQMRRVPIPPHRMTPLRNVWPKLYPPLVEHLLLQVRMNTKSRSVELRESKATKDPGALQKGMDFVQAFALGFDIDDAIALLRLDDLYIDTFEIKDVKTLQGDHLSRAIGRIAGQGGKTKFAIENASRTRIVLADSKIHILGGFTNIRIAKDAVVSLILGSPPGKVYANLRNAAARAKER 240          
The following BLAST results are available for this feature:
BLAST of EY693222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PNO1_COCIM4.795e-6462.12Pre-rRNA-processing protein PNO1 OS=Coccidioides i... [more]
PNO1_MOUSE1.068e-6356.04RNA-binding protein PNO1 OS=Mus musculus GN=Pno1 P... [more]
PNO1_HUMAN2.380e-6356.04RNA-binding protein PNO1 OS=Homo sapiens GN=PNO1 P... [more]
PNO1_BOVIN4.059e-6355.83RNA-binding protein PNO1 OS=Bos taurus GN=PNO1 PE=... [more]
PNO1_DEBHA2.015e-6259.80Pre-rRNA-processing protein PNO1 OS=Debaryomyces h... [more]
PNO1_KLULA7.656e-6260.41Pre-rRNA-processing protein PNO1 OS=Kluyveromyces ... [more]
PNO1_YARLI1.706e-6164.20Pre-rRNA-processing protein PNO1 OS=Yarrowia lipol... [more]
PNO1_DICDI1.706e-6162.01RNA-binding protein pno1 OS=Dictyostelium discoide... [more]
PNO1_CANGA3.800e-6159.02Pre-rRNA-processing protein PNO1 OS=Candida glabra... [more]
PNO1_SCHPO1.106e-6059.18Pre-rRNA-processing protein pno1 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693222 ID=EY693222; Name=EY693222; organism=Citrus sinensis; type=EST; length=947bp
CCACGCGTCCGGACATAGACATCACGGAGAGAAGACAGCTCGTATCTGAT
CTTGTGGTTGTTCACAATGCAGTCTTCCATGGACGTTGAAACAGTTCCAT
CTCAACTGCAAAATGAATCCGGGTCTCTGCCACCAAAGCCCCTGTTTGAG
CCATTGAAGGCTCATGAAATGTCTGATGGTCGAGTTCAGTTTCGGAAGGT
CAATGTTCCACCTCATCGGTACTCGCCTCTCAAGAAAATATGGATGGAAA
TCTACACTCCAATTTATGAACAGATGAAGATTGACATCCGTATGAACCTC
AAGGCTCGTAGGGTTGAATTGAAGACTAGAGCAGACACACCAGACATAAG
TAATTTACAGAAGTGTGCGGATTTTGTTCATGCATTCATGCTTGGTTTTG
ATGTTATCGATGCCATTGCACTTTTGCGTTTGGATGAGCTGTATATAGAA
TCTTTTGAGATCAAGGATGTTAAGACACTAAGAGGTGAGCATTTGTCACG
TGCCATAGGAAGACTATCTGGTAAAGGTGGCAAAACAAAGTTTGCTATCG
AGAATGCCACAAAAACAAGGATTGTGATTGCAGATTCGAAAATTCACATA
CTAGGATCTTTTGCCAATATTAAAATTGCAAGGGATTCCCTTTGTAGTCT
CATCTTANGATCTCCTGCTGGAAAGGTGTATTCGAAACTTAAAGCAGTGA
CTGCCAGATTGGCAGAAAGGTTTTGATCATTCTTATTTTTTTGTATGCAT
GCAAGGTTTCTCTATGGTGAGTATATCTAGGAGAGTGTAACCTGGTAGNT
AGGGATTTTGTCGTCCGAGTATCAACCAGGTACATTAAAAATAGTAGGAT
TATCATTATAAGTTTTTATAAATTTGNATGGTNGAAATTGGTTCGGAATC
AATACTTTTCGGGCTGGGGGATCACTTTTTCCATGTCAACACTCTTT
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