EY693221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROMA (Translation initiation factor IF-3 OS=Prochlorococcus marinus GN=infC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.270e-25 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTEGSEHRRGKKNKCR 837 I+ +R++DA +GI+ + EA+ +A+D ELDLV+VS ADPPV R+M+Y K+++E S ++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V +GR + N+A L+ R D+ E A + R+ RN+ +F + P E + +K + Sbjct: 23 IKYPKLRVVDADGTQLGIISREEALDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEPAEVQQAPKREGRNMIMFLTPRKTPLIKKEQELEEASKAK 198
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM3 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9303) GN=infC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.270e-25 Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 D I +R++DA +G++ + EA+ +A+D ELDLV+VS ADPPV R+MDY K+++E S ++ ++KE+KM Y IDQHDY+VR+ A +FLK GDKVK V +GR + +A L+RR D+ E A + R+ RN+ +F + P Sbjct: 21 DRINYPKLRVVDADGTQLGVINREEALDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNPW (Translation initiation factor IF-3 OS=Synechococcus sp. (strain WH7803) GN=infC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 63/158 (39.87%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 322 VRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 +R++DA +G++ + +A+++A++ ELDLV+VS ADPPV R+MDY KY++E S ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V +GR + +A L+RR D+ E A + R+ RN+ +F + P Sbjct: 28 LRVVDADGTQLGVIDREKALEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEPAEIQQPPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNS3 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) GN=infC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 D I +R++DA +G++ + +A+++A + ELDLV+VS ADPPV R+MDY K+++E S ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V +GR + +A L+RR D+ E A + R+ RN+ +F + P Sbjct: 21 DRINYPQLRVVDADGEQLGVIDREQALEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM9 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9312) GN=infC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 63/156 (40.38%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + EA+++A ELDLV+VS A+PPV RVMDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V +GR + N+A L+ + ND+ E + + K R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRLEALEIASQRELDLVLVSEKANPPVCRVMDYGKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEIQQKPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM0 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9301) GN=infC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 62/156 (39.74%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + +A+++A ELDLV+VS A+PPV R+MDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V +GR + N+A L+ R ND+ E + + K R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQKPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROMS (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain AS9601) GN=infC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.230e-25 Identity = 61/156 (39.10%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + +A+++A ELDLV+VS A+PPV R+MDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V +GR + N+A L+ + ND+ E + + K R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMANDLEEQSEVQQKPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM4 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9211) GN=infC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.075e-24 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 D I+ +R++DA +G++ + A+++A++ ELDLV+VS A+PPV R+M+Y K+++E S ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V +GR + N+A L+ R D+ E A + R+ RN+ +F + P Sbjct: 21 DRIKYPQLRVVDADGTQLGVINREAALEVAQERELDLVLVSEKANPPVCRIMNYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYEVRINQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEQAEVQQTPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_ACAM1 (Translation initiation factor IF-3 OS=Acaryochloris marina (strain MBIC 11017) GN=infC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.075e-24 Identity = 64/175 (36.57%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 250 RRRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 R +Q + ++ E IR +R++DA +GI+ SEA+++A++ LDLV+VS ADPPV RVMDY K+++E + D+KE+KM Y I HDY VR+ A++FLK GDKVK V +GR + ++A L+++ ND+ + A + R+ RN+ ++ Sbjct: 7 RNQQNQPNINER-------IRFPKIRVVDADGTQLGIMAPSEAMEIADERNLDLVLVSDKADPPVCRVMDYGKFKFE--QEKKAREAKKKQHTSDVKEVKMRYKIQTHDYEVRVNHAKRFLKSGDKVKATVTFRGREIQHSHLAEALLKKMANDLLDFAEIQQAPKREGRNMIMY 172
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_THEEB (Translation initiation factor IF-3 OS=Thermosynechococcus elongatus (strain BP-1) GN=infC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 268 KDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIF 771 K ++EQ + I VR++D + +GI+ EAI +A + ELDLV+VS ADPPV +++DY K+R+E + D+KE+KM Y I++HDY+V + A +FLK GDKVK V +GR + ++A EL+ R ND+ +A ++ RN+ +F Sbjct: 11 KKTQQEQPMINERIHFPRVRVVDTDGSQLGIMSSQEAIAIAREKELDLVLVSDKADPPVCKIIDYGKFRFE--QEKKAREARKKQHTSDVKEVKMRYKIEEHDYNVCINRAERFLKAGDKVKATVTFRGREIQHSHLAEELLNRMANDLQAVAEVQQAPKQEGRNMIMF 177 The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bpback to top |