EY693221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_NEIMA (Translation initiation factor IF-3 OS=Neisseria meningitidis serogroup A GN=infC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.104e-20 Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 274 LEEEQAFDIDG-IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738 + +E+ I+G I + VRLI +G+V EA+ MAE ++DLV +SP A PPV ++MDY KY+Y+ ++ +KE+K D+ DY ++++ +FL DGDKVKV + +GR + + +L+ R + D+ E+A E+ Sbjct: 2 IAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQ--KQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIES 155
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_NEIG1 (Translation initiation factor IF-3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=infC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.104e-20 Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 274 LEEEQAFDIDG-IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738 + +E+ I+G I + VRLI +G+V EA+ MAE ++DLV +SP A PPV ++MDY KY+Y+ ++ +KE+K D+ DY ++++ +FL DGDKVKV + +GR + + +L+ R + D+ E+A E+ Sbjct: 2 IAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQ--KQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIES 155
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_AZOC5 (Translation initiation factor IF-3 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=infC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.104e-20 Identity = 48/143 (33.57%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEE 735 IR V+LID G++P +A+ +A++A LDLV +SP++ PPV +++D+ +++Y+ +++KE+K+ ID HDY V++KA +F ++GDKVKV + +GR ++I +L+++ + DV +A E Sbjct: 17 IRIREVQLIDQDGQNRGVLPTRDALLLAQEAGLDLVEISPNSSPPVCKILDFGRFKYQNQKKASEARKKQKV--VEVKEIKLRPGIDTHDYDVKMKAMLRFFEEGDKVKVTLRFRGREMAHQDIGYKLLQKLKEDVTNIAKVE 157
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACTN (Translation initiation factor IF-3 OS=Bacteroides thetaiotaomicron GN=infC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20 Identity = 54/140 (38.57%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELA 726 IR+ VR++ + + P +A++MAE+ ELDLV +SP+A PPV R++DY+K+ Y+ ++++KE++ G D HDY+ +LK AR FL+DGDKVK V +GR F+ L+ RF ND+ + A Sbjct: 16 IRAKEVRIV-GDEIEPKVYPIFQALKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFA 152
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PSEE4 (Translation initiation factor IF-3 OS=Pseudomonas entomophila (strain L48) GN=infC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEE 735 + I + VRLI A +GIV EA+++A++A+LDLV +S DA PPV +VMDY K+ +E ++ +KE+K ++ DY V+L+ +FL DGDK K+ + +GR + + +EL++R + D+ E + E Sbjct: 21 ENISAREVRLIGADGEQIGIVSIDEALRIADEAKLDLVEISADAQPPVCKVMDYGKHLFEKKKQANEAKKNQ--KQIQIKEIKFRPGTEEGDYQVKLRNLVRFLSDGDKAKISLRFRGREMAHQELGMELLKRVETDLAEYGTVE 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_METRJ (Translation initiation factor IF-3 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=infC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 49/149 (32.89%), Postives = 90/149 (60.40%), Query Frame = 1 Query: 295 DIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK 741 DI G+R V+LID G+VP +A+ +AE+ LDLV ++P++ PPV +++DY ++R+ +++KE+K+ ID+HDY ++K+ +F ++GDKVKV + +GR ++I + L+ R +++ E+A E++ Sbjct: 14 DIRGVRE--VQLIDDTGQNRGVVPFFDALNLAEEVGLDLVEIAPNSVPPVCKLLDYGRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYDTKMKSVHRFFEEGDKVKVTLRFRGREMAHQDIGLRLLERVKSETAEIAKVESE 158
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BARHE (Translation initiation factor IF-3 OS=Bartonella henselae GN=infC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 50/145 (34.48%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK 741 IR V+LI+ + G+V EA+ MA + LDLV + P+A+PPV +++D K +Y+ +++KE+KM N+D HDY V+LKA +F+ +GDKVK+ + +GR +++ ++L++R + D E+A E++ Sbjct: 15 IRVPRVQLINDEGQHQGVVTIQEALAMAAEVGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAIHRFIGNGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESE 157
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_XANAC (Translation initiation factor IF-3 OS=Xanthomonas axonopodis pv. citri GN=infC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 49/138 (35.51%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGE 720 IR VR+I + MVG++ + EA+ AE+ LDLV + P ADPPV ++MD+ K+++E ++++KELK D+ DY ++L+ R+FL++GDKVKV + +GR + + E+ R + D+G+ Sbjct: 22 IRVPRVRVIGSDGEMVGVLSRDEALAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFE--QQKKANEAKKKTKQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGD 157
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STRCO (Translation initiation factor IF-3 OS=Streptomyces coelicolor GN=infC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 D IR VRL+ VGIVP ++A+++A++ +LDLV V+ +A PPV ++MDY K++YE A +KE+K+ ID HDY + +FLK GDKVK+ + +GR + L++R DV +L E+ +D RN+ + Sbjct: 9 DRIRVPEVRLVGPSGEQVGIVPLAKALELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQA--HTVIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNPKQDGRNMIM 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BART1 (Translation initiation factor IF-3 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=infC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 301 DGIRSNT------VRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEE 735 DG RSN V+LI+ + G+V EA+ MA +A LDLV + P+A+PPV +++D K +Y+ +++KE+K+ N+D HDY V+LKA +F+ GDKVK+ + +GR +++ ++L++R + D E+A E Sbjct: 7 DGPRSNQDIRVPHVQLINDEGQHQGVVSIQEALAMAAEAGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKV--IEIKEIKVRPNVDVHDYGVKLKAIHRFIDHGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIE 155 The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bpback to top |