EY693221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNS9 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9902) GN=infC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 D I +R++D+ + +G++ + EA++++++ ELDLV+VS ADPPV R+MDY K+++E S ++ ++KE+KM Y ID HDY VR+ A++FLK GDKVK V +GR + +A L+RR D+ E A + R+ RN+ +F + P Sbjct: 21 DRISYPQLRVVDSDGSQLGVISREEALEVSKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEKAEIQQSPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNP2 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=infC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 63/173 (36.42%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 253 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 +R+ ++DL + + IR +R+I +GI+ +EA+ +AE+ +LDLV+VS A PPV R+MDY KY++E + DLKE+KM Y I++HDY VR+ +A++FLK GDKVK + +GR + N+A +L+ R D+ E+ + + R+ RN+ + Sbjct: 4 KRRVKRDLPKIN----ERIRFPNIRVISGDGEQLGIMTPAEALAIAEEEDLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQ--HNADLKEVKMRYKIEEHDYQVRVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNMMM 170
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_THETN (Translation initiation factor IF-3 OS=Thermoanaerobacter tengcongensis GN=infC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 61/155 (39.35%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 IR VRLID +GI+ EA ++A++ LDLV + P+A+PPV ++MD+ KYRYE +++KE++M NI+ HD+ V+LK+A KFLKDGDKVKV + +GR ++A +L++RF ++ E + E D RN+ + Sbjct: 21 IRDKEVRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELSKREKEAKKKQKI--INVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLAEDLLKRFAEELREYGNVEKAPSMDGRNMMM 173
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SILPO (Translation initiation factor IF-3 OS=Silicibacter pomeroyi GN=infC PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738 D IR++ +RLI A VG+V ++A+ MAE+A LDLV +SP+A PPV ++MD+ KY+YE +++KE+K N D HDY V+++ KFL++GDKVKV + +GR +N+ EL+ R DV E+ EN Sbjct: 20 DKIRASEIRLIGADGENVGVVHPAKAMAMAEEAGLDLVEISPNATPPVCKIMDFGKYKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKEMGKIEN 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM2 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9215) GN=infC PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 60/156 (38.46%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + +A+++A ELDLV+VS A+PPV R+MDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V +GR + N+A L+ + +D+ E + + K R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRLKALEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMASDLEEQSEVQQKPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM1 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain NATL1A) GN=infC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24 Identity = 60/163 (36.81%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 I +++R++D+ +G++ + EA+++A++ ELDLV+VS A PPV R+M+Y K+++E S ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V +GR + +A L++R D+ E A + R+ RN+ +F + P Sbjct: 23 ISYSSLRVVDSDGTQLGVISREEALEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMSKDLEEKAEVQQSPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3C_PORYE (Translation initiation factor IF-3, chloroplastic OS=Porphyra yezoensis GN=infC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24 Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = 1 Query: 244 YSRRRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 Y ++ +DL + D IR VR+ID + +GI EAIQ+A LDLV+VS +DPPV R++DY KY++ + +KE+KM Y I++HDY VR+ A KF++ GDKVK + +GR + N+AI+L+ + +D+ +A + RD RN+ + Sbjct: 5 YKNSKKLSRDLPQIN----DRIRFPKVRVIDDEGEQLGIFVPEEAIQLAVQQGLDLVVVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQ--HNSSIKEVKMRYKIEEHDYKVRINQASKFIQAGDKVKATITFRGREIQHSNLAIDLLNKMASDLNAIAEIQQAPSRDGRNVIM 174
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNR3 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain RCC307) GN=infC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.335e-24 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF------*VQKGPPTEGSEHRR 816 D I +R++DA +G++ + EA+ +A + ELDLV+VS ADPPV R+MDY K+++E S ++ ++KE+KM Y ID HDY VR+ A +FLK GDKVK V +GR + +A +L+ R D+ E A + R+ RN+ +F +QK P + ++ R Sbjct: 21 DRINYPKLRVVDADGTQLGVISRDEALDVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDAHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAEKLLMRMAKDLEESAEVQQPPKREGRNMIMFLGPRKTPLQKDKPEQATKAER 197
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROM5 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9515) GN=infC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.335e-24 Identity = 60/156 (38.46%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + +A+++A ELDLV+VS A+PPV R+MDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V +GR + N+A L+ R ND+ E + + + R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRIKALEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQRPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_GLOVI (Translation initiation factor IF-3 OS=Gloeobacter violaceus GN=infC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.335e-24 Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFI 768 IR +R IDA +GI+ +A+++AE+ LDLV+VS DA PPV R+MDY KY++E + D+KE+KM Y I +HDY VRL+ +FLKDGDKVK + +GR + N+A +L+ + D E+ ++ + RN+ + Sbjct: 40 IRFPKIRAIDADGTQLGIMHPRDALRIAEERNLDLVVVSEDAQPPVCRIMDYGKYKFE--QEKRAKEARKKQHTADVKEVKMRYTIGEHDYQVRLRDTIRFLKDGDKVKATIMFRGREIQHANLAKDLLMQLAADSAEIGEVQQEPSVEGRNMIM 192 The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bpback to top |