EY693221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROMT (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain NATL2A) GN=infC PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24 Identity = 63/181 (34.81%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 253 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792 RR E++L + I +++R++D+ +G++ + +A+++A++ ELDLV+VS A PPV R+M+Y K+++E S ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V +GR + +A L++R D+ E A + R+ RN+ +F + P Sbjct: 9 RRAPERELPNIN----ERISYSSLRVVDSDGTQLGVISREDALEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMAKDLEEKAEVQQSPKREGRNMIMFLTPRKTP 183
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_LISMO (Translation initiation factor IF-3 OS=Listeria monocytogenes GN=infC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23 Identity = 60/157 (38.22%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 DGIR+ VRLID +G+ K +A+Q+AE A LDLV+V+P A PPV R+MDY K+R+E + +KE+++ ID+HD+ +L+ ARKFL+ GDKVK + +GR + I +++ RF +L + E + D R++F+ Sbjct: 9 DGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFL 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_LISMF (Translation initiation factor IF-3 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=infC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23 Identity = 60/157 (38.22%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 DGIR+ VRLID +G+ K +A+Q+AE A LDLV+V+P A PPV R+MDY K+R+E + +KE+++ ID+HD+ +L+ ARKFL+ GDKVK + +GR + I +++ RF +L + E + D R++F+ Sbjct: 9 DGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFL 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_LISIN (Translation initiation factor IF-3 OS=Listeria innocua GN=infC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23 Identity = 60/157 (38.22%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 DGIR+ VRLID +G+ K +A+Q+AE A LDLV+V+P A PPV R+MDY K+R+E + +KE+++ ID+HD+ +L+ ARKFL+ GDKVK + +GR + I +++ RF +L + E + D R++F+ Sbjct: 9 DGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFL 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_ENTFA (Translation initiation factor IF-3 OS=Enterococcus faecalis GN=infC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 58/157 (36.94%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFI 768 DGIR+ +RLI +G+ K+EA+Q+AE A LDLV+V+P A PPV R+MDY K+R+E +++KE+++ ID +D++ +L+ ARKFL+ GDKVK + +GR + I +++ R + ++A+ E K D R++F+ Sbjct: 11 DGIRARELRLIGQDGEQLGVKTKAEALQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFL 165
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACHD (Translation initiation factor IF-3 OS=Bacillus halodurans GN=infC PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768 +GIR+ VRLI A + +G+ K+EA+ MA + LDLV V+P+A PPV R+MDY KYRYE +++KE+++ I+ HD++ +L+ ARKFL GDKVK + +GR I ++ R + ++A E K R++F+ Sbjct: 9 EGIRAREVRLIGANGDQIGVKSKAEALDMARNVNLDLVCVAPNAKPPVCRIMDYGKYRYE--QQKKDKEARKKQKTINVKEVRLSPTIEDHDFNTKLRNARKFLSKGDKVKAAIRFRGRAITHSEIGRNVLERLAKECEDIAIVEAKPKMEGRSMFL 163
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STAES (Translation initiation factor IF-3 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768 IR+ +RLI +G+ K EA++MAE +LDLV+V+P+A PPV R+MDY KY++E +++KEL++ I++HD+ +LK RKFL GDK KV + +GR + I ++ +F ++ ++A+ E K R +FI Sbjct: 15 IRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKV--INVKELRLSPTIEEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFI 167
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STAEQ (Translation initiation factor IF-3 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768 IR+ +RLI +G+ K EA++MAE +LDLV+V+P+A PPV R+MDY KY++E +++KEL++ I++HD+ +LK RKFL GDK KV + +GR + I ++ +F ++ ++A+ E K R +FI Sbjct: 15 IRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKV--INVKELRLSPTIEEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFI 167
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROMP (Translation initiation factor IF-3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 58/156 (37.18%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771 I+ +R++D+ +G++ + +A+++A LDLV+VS A+PPV R+MDY KY++E S ++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V +GR + N+A L+ + ND+ E + + + R+ RN+ +F Sbjct: 23 IKYPQLRVVDSDGKQLGVIDRIKALEIAHQRGLDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKETKKKS--HQTEVKEVKMRYKIDKHDYDVRIGQAVRFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEVQQRPKREGRNMIMF 176
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PASMU (Translation initiation factor IF-3 OS=Pasteurella multocida GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738 D IR VRLID GIV +A++MAE AELDLV +SP+A+PPV R+M+Y K+ YE + +KE+K D+ DY V+L++ +FL++GDK K+ V +GR ++I +E++ R +ND+ E++ E+ Sbjct: 18 DEIRVKEVRLIDQDGEQAGIVSIQQALEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKV--VQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIGLEVLERVKNDLAEISVVES 161 The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bpback to top |